Pairwise Alignments

Query, 161 a.a., ECF subfamily RNA polymerase sigma-24 factor from Pseudomonas putida KT2440

Subject, 171 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas fluorescens FW300-N2E2

 Score = 67.0 bits (162), Expect = 1e-16
 Identities = 39/140 (27%), Positives = 68/140 (48%)

Query: 7   FLDHYHELIGTWTRKLRSRQQAEDLTHDAFVRVLETPREQVEQPRAYLHQAARNIAVDGF 66
           +  H+  L  T  +KL +   A DL  D F R+L +    ++QPRAYL   A+ I ++ +
Sbjct: 20  YAGHHSWLYATLKKKLGNAMDAADLAQDTFTRILASQVTAIDQPRAYLSCVAKGILINWY 79

Query: 67  RREDRRQALEREAFEEGATGSGDPEAYVHALELADSVERALAELPLNCRQVFIWQKLEGL 126
           +R+   +A         A     PE     LE    ++  L  LP   ++ F+  ++ GL
Sbjct: 80  QRKALERAYLEALAHLPAEEVPSPELRFLVLETLHEIDAMLDTLPAPVKRAFLLSQIGGL 139

Query: 127 TQAEIAERMGLSKNMVEKYM 146
              +IA+++ +S   V++YM
Sbjct: 140 KYDDIAQQLNVSLITVKRYM 159