Pairwise Alignments

Query, 161 a.a., ECF subfamily RNA polymerase sigma-24 factor from Pseudomonas putida KT2440

Subject, 165 a.a., RNA polymerase sigma factor, sigma-70 family from Pseudomonas stutzeri RCH2

 Score = 85.1 bits (209), Expect = 5e-22
 Identities = 53/148 (35%), Positives = 79/148 (53%), Gaps = 1/148 (0%)

Query: 7   FLDHYHELIGTWTRKLRSRQQAEDLTHDAFVRVLET-PREQVEQPRAYLHQAARNIAVDG 65
           ++ H  +L+   TR    R  AEDL  DA++++ +  P ++++ P+AYL + A N+  D 
Sbjct: 15  YIHHRQQLVAHLTRLGGCRALAEDLAQDAWLKLAQIMPEQRLDNPKAYLFRIATNLLRDA 74

Query: 66  FRREDRRQALEREAFEEGATGSGDPEAYVHALELADSVERALAELPLNCRQVFIWQKLEG 125
            RR     A +    E       DP A V        V R LA+LP  CR+VF   +LEG
Sbjct: 75  MRRRALLGASDEGPLELIEAVQADPCALVENHCALQCVLRQLADLPPRCREVFELARLEG 134

Query: 126 LTQAEIAERMGLSKNMVEKYMIRTLRHL 153
           L+QAEIAER+G+S N V   + +  + L
Sbjct: 135 LSQAEIAERLGISVNTVIAQLAKARQRL 162