Pairwise Alignments

Query, 161 a.a., ECF subfamily RNA polymerase sigma-24 factor from Pseudomonas putida KT2440

Subject, 214 a.a., Sigma-24 (FecI) (NCBI) from Rhodospirillum rubrum S1H

 Score = 70.9 bits (172), Expect = 1e-17
 Identities = 48/155 (30%), Positives = 76/155 (49%), Gaps = 6/155 (3%)

Query: 7   FLDHYHELIGTWTRKLRSRQQAEDLTHDAFVRVLETPRE-QVEQPRAYLHQAARNIAVDG 65
           F  +   L+G  TR ++ RQ AEDLT + ++RV        ++   A+LH+ ARN+A+D 
Sbjct: 43  FESYRRSLLGKLTRIVQDRQIAEDLTQETYLRVRRAAESGPIDHIEAFLHRTARNLALDH 102

Query: 66  FRREDRRQALEREAFEEGATG--SGDPEAYVHAL---ELADSVERALAELPLNCRQVFIW 120
            RR  RR  +   A E+GA    + D  +   AL   +    +  A+A LP   R V   
Sbjct: 103 LRRTKRRAGMGSSAVEDGAIDDLADDRPSAEEALIERQTLTVLSEAMARLPQRARLVLTL 162

Query: 121 QKLEGLTQAEIAERMGLSKNMVEKYMIRTLRHLRE 155
            ++E     +IA  +G+S+  V   +   L H R+
Sbjct: 163 SRVEDWPNTKIAAHLGISERTVFNDLKLALGHCRD 197