Pairwise Alignments

Query, 380 a.a., conserved lipoprotein of unknown function from Pseudomonas putida KT2440

Subject, 392 a.a., outer membrane protein assembly factor BamB from Klebsiella michiganensis M5al

 Score =  198 bits (504), Expect = 2e-55
 Identities = 114/381 (29%), Positives = 189/381 (49%), Gaps = 12/381 (3%)

Query: 10  LTLAVLAAGCSSNSKKE--LPPAELTKFTEEVVLKKQWSRSIGDGQGETYNTLVPAIEND 67
           L    L +GCS  + +E  +  + L     +      WS S+G G GE Y+ L PA  + 
Sbjct: 11  LLSVTLLSGCSLFNSEEDVVKMSPLPTVENQFTPSTSWSTSVGGGIGEFYSNLHPAFADG 70

Query: 68  RIYASDVNGEVFALDRITGDVVWKKDLELQ----------VSGAVGVGYGLVMLGTLKGE 117
            +YA+D  G V AL+   G  VW  +L  +          +SG V V  G V +G+ K +
Sbjct: 71  VVYAADRKGTVKALNSGDGKEVWSVNLAEKDGWFSRAPALLSGGVTVSGGHVYIGSEKAK 130

Query: 118 VIALDSSTGEERWRSRVTSEVLAPPANNGDVVVVQTQDDRLIGLDAATGDRRWIYENSPA 177
           V AL++S G   W + V  E ++ P  +  +V++ T + +L  L+ A G  +W       
Sbjct: 131 VYALNTSDGTVAWEASVAGEAISRPVVSDGMVLIHTTNGQLQALNEADGAVKWTVNLDMP 190

Query: 178 VLTLRGTGAPIATNRLAVAGLSTGKVVAVDINNGVPVWESRVAIPKGRSELDRVVDIDGG 237
            L+LRG  AP      A+ G   G+V AV +  G  +W+ R++   G +E+DR+ D+D  
Sbjct: 191 ALSLRGESAPATAYGAAIVGGDNGRVSAVLMQQGQMIWQQRISTATGPTEIDRLNDVDTT 250

Query: 238 LLLSGGTLYVSTYQGRVAGLDLESGRELWQRDASSYVGVAQGFGNVYVSEASGTVESVDE 297
            ++  G +Y   Y G +  LDL SG+ +W+R+  S          +Y+ + +  + ++  
Sbjct: 251 PVIVNGVIYALAYNGNLTALDLRSGQIMWKRELGSVNDFIVDGNRIYLVDQNDRLLALTT 310

Query: 298 RSSSALWSNDSMARRQLTAPEVFSSYVAVGDFEGYLHLLSQVDGRFVGRERIDSDGLRAR 357
                LW+   +  R LTAP +++  + VGD EGY+H ++  DG FV ++++DS G    
Sbjct: 311 DGGVTLWTQSDLLHRLLTAPVLYNGNLVVGDSEGYMHWVNPEDGHFVAQQKVDSSGFLTD 370

Query: 358 PLVVGDTIYVFGNSGKLEALT 378
           P+V    + +    G L A+T
Sbjct: 371 PVVADGKLLIQAKDGTLYAIT 391



 Score = 54.7 bits (130), Expect = 4e-12
 Identities = 46/212 (21%), Positives = 92/212 (43%), Gaps = 21/212 (9%)

Query: 187 PIATNRLAVAGLSTGKVVAVDINNGVPVWESRVAIPKGRSELDRVVDIDGGLLLSGGTLY 246
           P   + +  A    G V A++  +G  VW   +A   G       + + GG+ +SGG +Y
Sbjct: 65  PAFADGVVYAADRKGTVKALNSGDGKEVWSVNLAEKDGWFSRAPAL-LSGGVTVSGGHVY 123

Query: 247 VSTYQGRVAGLDLESGRELWQR----DASSYVGVAQGFGNVYVSEASGTVESVDERSSSA 302
           + + + +V  L+   G   W+     +A S   V+ G   V +   +G +++++E   + 
Sbjct: 124 IGSEKAKVYALNTSDGTVAWEASVAGEAISRPVVSDGM--VLIHTTNGQLQALNEADGAV 181

Query: 303 LWSND----SMARRQLTAPEVFSSYVAVGDFEGYLHLLSQVDGRFVGRERIDS------- 351
            W+ +    +++ R  +AP        VG   G +  +    G+ + ++RI +       
Sbjct: 182 KWTVNLDMPALSLRGESAPATAYGAAIVGGDNGRVSAVLMQQGQMIWQQRISTATGPTEI 241

Query: 352 ---DGLRARPLVVGDTIYVFGNSGKLEALTIR 380
              + +   P++V   IY    +G L AL +R
Sbjct: 242 DRLNDVDTTPVIVNGVIYALAYNGNLTALDLR 273