Pairwise Alignments

Query, 369 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase from Pseudomonas putida KT2440

Subject, 372 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (RefSeq) from Shewanella amazonensis SB2B

 Score =  518 bits (1333), Expect = e-151
 Identities = 266/358 (74%), Positives = 301/358 (84%), Gaps = 2/358 (0%)

Query: 1   MHGESPIKRRESRKIWVGNVPVGGDAPIAVQSMTNTDTNDVAATVAQIQRLVDAGVDIVR 60
           M  E+PIKRR S +I+VGNVP+G  APIAVQSMTNT T DVAATVAQI+ L + G DIVR
Sbjct: 1   MFNENPIKRRPSTRIYVGNVPIGDGAPIAVQSMTNTRTTDVAATVAQIRALENVGADIVR 60

Query: 61  VSVPDMDAAEAFGKIKQRVSVPLVADIHFDYKIALRVAELGVDCLRINPGNIGREDRVRA 120
           VSVP MDAAEAF +IKQ+V VPLVADIHFDY+IAL+VAE GVDCLRINPGNIG E+R+RA
Sbjct: 61  VSVPTMDAAEAFRQIKQQVKVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIRA 120

Query: 121 VVDAARDRGIPIRIGVNAGSLEKDLQKKYGEPTPAALVESALRHVEHLDRLDFQDFKVSV 180
           VVD ARD+ IPIRIGVN GSLEKDL  KY EPTP AL+ESA+RHV+ LDRL+F  FKVSV
Sbjct: 121 VVDCARDKNIPIRIGVNGGSLEKDLMDKYKEPTPEALLESAMRHVDILDRLNFDQFKVSV 180

Query: 181 KASDVFMAVEAYRLLAKQIVQPLHLGITEAGGLRSGTVKSAVGLGMLLAEGIGDTIRISL 240
           KASDVF+AVE+YRLLAKQI QPLHLGITEAGG R+G VKSAVGLGMLLAEGIGDT+RISL
Sbjct: 181 KASDVFLAVESYRLLAKQIKQPLHLGITEAGGARAGAVKSAVGLGMLLAEGIGDTLRISL 240

Query: 241 AADPVEEVKVGYDILKSLHLRSRGINFIACPSCSRQNFDVVKTMNELEGRLEDLLVPLDV 300
           AADPVEEVKVG+DILKSL +RSRGINFIACPSCSRQ FDV+ T+NELE RLED+   +DV
Sbjct: 241 AADPVEEVKVGFDILKSLRIRSRGINFIACPSCSRQEFDVISTVNELERRLEDVTTAMDV 300

Query: 301 AVIGCVVNGPGEAKEAHVGLTGGTPNLIYIDG--KPAQKLTNDNLVDELEKLIRQKAA 356
           ++IGCVVNGPGEA  +H+GL GG     Y D   +  ++  NDNLVD LE  IR KA+
Sbjct: 301 SIIGCVVNGPGEALVSHLGLAGGHKKSGYYDDGIRQKERFDNDNLVDALEAKIRAKAS 358