Pairwise Alignments

Query, 369 a.a., 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase from Pseudomonas putida KT2440

Subject, 412 a.a., 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase from Dechlorosoma suillum PS

 Score =  197 bits (501), Expect = 4e-55
 Identities = 146/397 (36%), Positives = 208/397 (52%), Gaps = 47/397 (11%)

Query: 7   IKRRESRKIWVGNVPVGGDAPIAVQSMTNTDTNDVAATVAQIQRLVDAGVDIVRVSVPDM 66
           I RR +  + VG V +GGDAP+ VQSMTNTDT D  AT  Q   L  AG ++VR++V   
Sbjct: 7   IPRRPTLGVKVGGVTIGGDAPVVVQSMTNTDTEDYLATALQTAELARAGSELVRITVNTP 66

Query: 67  DAAEAFGKIKQR-----VSVPLVADIHFDYKIALRVAELGVDCL---RINPGNIG----R 114
           +AA A  KI++      +SVPL+ D H++    L         L   RINPGN+G    R
Sbjct: 67  EAAAAVPKIREHLDRLGLSVPLIGDFHYNGHRLLTDHPECAQALAKYRINPGNVGHGKKR 126

Query: 115 EDRVRAVVDAARDRGIPIRIGVNAGSLEKDL-------QKKYGEPTPA------ALVESA 161
           +++   +++ A     P+RIGVN GSL++DL         K  EP  A      A+V SA
Sbjct: 127 DEQFAQMIELACKYDKPVRIGVNWGSLDQDLLARIMDENAKRPEPKDAVQIMREAMVTSA 186

Query: 162 LRHVEHLDR--LDFQDFKVSVKASDVFMAVEAYRLLAKQIVQPLHLGITEAGGLRSGTVK 219
           L   E      L      +S K S V   +  YR L+ +    LHLG+TEAG    G V 
Sbjct: 187 LESAEKAVEIGLPADHIVLSCKVSGVQDLIAIYRELSARSRFALHLGLTEAGMGSKGIVA 246

Query: 220 SAVGLGMLLAEGIGDTIRISLAADP----VEEVKVGYDILKSLHLRSRGINFIACPSCSR 275
           S   +G+LL EGIGDTIR+SL  +P      EV V  ++L+++ LR+      ACP C R
Sbjct: 247 STAAMGVLLQEGIGDTIRVSLTPEPGGKRTGEVIVAQEMLQTMGLRAFTPMVAACPGCGR 306

Query: 276 QNF----DVVKTMNEL------EGRLE-DLLVPLDVAVIGCVVNGPGEAKEAHVGL---- 320
                  ++  T+ E       + R E D +  + +AV+GCVVNGPGE+K A++G+    
Sbjct: 307 TTSTFFQELASTIQEYVRAQMPQWRTEYDGVENMTLAVMGCVVNGPGESKHANIGISLPG 366

Query: 321 TGGTPNL-IYIDGKPAQKLTNDNLVDELEKLIRQKAA 356
           TG  P   ++ DG+    L  DN+ +E + ++ +  A
Sbjct: 367 TGEVPAAPVFEDGEKTVTLRGDNIAEEFKAIVDRYVA 403