Pairwise Alignments

Query, 335 a.a., Transcriptional regulator, Cro/CI family from Pseudomonas putida KT2440

Subject, 360 a.a., cytoskeleton protein RodZ from Vibrio cholerae E7946 ATCC 55056

 Score =  140 bits (354), Expect = 4e-38
 Identities = 93/335 (27%), Positives = 165/335 (49%), Gaps = 19/335 (5%)

Query: 16  PGELLRLAREKRDWSQAEVARKLNLTVSSLNHVETGAFDKLPGHTFARGYIRAYAKLMDL 75
           PG LL+  RE    +Q ++A +L L +S +  +E   F+     TF RGY+R+YAK + +
Sbjct: 27  PGTLLKQKREDLGLTQRQIADRLRLRLSIIQSIEENRFEDGQVATFTRGYLRSYAKAVGI 86

Query: 76  DQAALVDAFD-RYTGTHAKGSDVHSLGRIEEPVRLSHNILRGVSLLLLVAVVGGGFFWW- 133
            ++ ++ AFD  Y        D+ S  + +   +L  + +  ++ ++L  +VG    WW 
Sbjct: 87  RESEILCAFDDSYCQKPEVQPDMKSFSK-KTKRQLHDSRIMLITWVILAVIVGMSTLWWW 145

Query: 134 ---------QDQGSLRGKELAKIALEHVEVESADGTTQIHPLDEPEDQAVSAGQQPESAP 184
                     D+ ++    ++ I   +    + +    + PL+E +D A ++ + P S  
Sbjct: 146 QNSQKNSLIPDKTTIAPSAISDIQSSNDASLANEDFATVPPLNELQDAAPASEEAPMSQE 205

Query: 185 LALEQGAAEQPAAAEQAPVSSEATI----ATAPVQPAPAASPAPVTPPVQATAAPAPAPA 240
               + +   P A  +A V ++  +    A APV PA      PV       AAP   P 
Sbjct: 206 SLSGEASELTPPAPNEADVVTDKPVVEETAAAPVAPAQPQGQTPVQSQAPVAAAPVTQPE 265

Query: 241 PAPAVAAVEP--AAVPAGSAKVAIQFTADCWTQVSDGNGKVLFSAIKRKGDNLELTGKPP 298
            AP+ A  +P  ++  + SA + + F+ADCW QV D  GK L + +K+ G ++ L+G+ P
Sbjct: 266 AAPS-APSQPVSSSTESASALLVMNFSADCWIQVKDATGKTLSTGVKKAGQSVSLSGQRP 324

Query: 299 FAVRLGFARGAQVSYNGQAVDVAPFTSGETARLKL 333
           + + LG   G  ++   + VD++ +TSG+ ARL L
Sbjct: 325 YKLVLGAPEGVSITLASEPVDLSGYTSGKVARLTL 359