Pairwise Alignments

Query, 255 a.a., Type IV pili biogenesis protein PilF from Pseudomonas putida KT2440

Subject, 344 a.a., tetratricopeptide repeat protein from Methanococcus maripaludis S2

 Score = 42.0 bits (97), Expect = 2e-08
 Identities = 38/165 (23%), Positives = 73/165 (44%), Gaps = 2/165 (1%)

Query: 37  EAGRAYVQLGLGYLQQGLTEQAKAPLGKALALDDQDVDAHAALAVVFQAQGEPALAEAHF 96
           ++   +V  G   L+ G+  ++     KAL +D ++ +A   L  V    G    A   +
Sbjct: 57  KSAEIWVNKGNSLLKLGIYGESTECFDKALLIDPENSEAFNGLGTVLSKTGNYQKALEMY 116

Query: 97  RKALLISRGDTRIRNNYGSFLYAQGRFAEAKQMFRLASADTLYPERSRVYENLGLTALKL 156
            K+L I   ++    N G  L    R++EA   F    + ++  + S V+ N G T  KL
Sbjct: 117 DKSLNIDSENSEAWKNKGITLNNMQRYSEAIDCFD--KSISINAKNSDVWYNKGETQFKL 174

Query: 157 ERRDQAHAYLLKALQLNQRQPKALLEMAELSYENRHYVPARDYYD 201
              +++     KAL ++++   ALL       + ++Y  A + ++
Sbjct: 175 GEYEKSIDSYNKALLIDEKMETALLGKGNSYLKLQNYESAIECFN 219



 Score = 33.1 bits (74), Expect = 8e-06
 Identities = 22/103 (21%), Positives = 48/103 (46%), Gaps = 2/103 (1%)

Query: 111 NNYGSFLYAQGRFAEAKQMFRLASADTLYPERSRVYENLGLTALKLERRDQAHAYLLKAL 170
           N+ G  LY QG + ++   + LA  +   P+ + ++ N G + LKL    ++     KAL
Sbjct: 29  NDKGLELYNQGNYVDSISEYNLALLEN--PKSAEIWVNKGNSLLKLGIYGESTECFDKAL 86

Query: 171 QLNQRQPKALLEMAELSYENRHYVPARDYYDRFSQLSDHDARS 213
            ++    +A   +  +  +  +Y  A + YD+   +   ++ +
Sbjct: 87  LIDPENSEAFNGLGTVLSKTGNYQKALEMYDKSLNIDSENSEA 129