Pairwise Alignments

Query, 381 a.a., Dual-specificity RNA methyltransferase RlmN from Pseudomonas putida KT2440

Subject, 373 a.a., bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN from Vibrio cholerae E7946 ATCC 55056

 Score =  401 bits (1030), Expect = e-116
 Identities = 207/359 (57%), Positives = 257/359 (71%), Gaps = 3/359 (0%)

Query: 4   STGKINLLGLTQPEMEQFF-DSIGEKRFRAGQVMKWIHHFGVSDFAAMTNVGKVLREKLE 62
           +T KINLL   +  +  FF + +GEK FRA QVMKWI+HFG  DF  M N+ K LREKL+
Sbjct: 2   TTEKINLLDFDRKGLRTFFAEELGEKAFRAEQVMKWIYHFGCDDFDQMNNINKQLREKLK 61

Query: 63  AVAEIRPPEVVSEDISADGTRKWVIRVASGSCVETVYIPTDDRGTLCVSSQAGCALDCSF 122
           A  EIR P V     SADGT KW +RV     VETVYIP DDR TLCVSSQ GCAL+C F
Sbjct: 62  AKCEIRAPYVSEAQHSADGTIKWAMRVGDQD-VETVYIPEDDRATLCVSSQVGCALECKF 120

Query: 123 CSTGKQGFNSNLTAAEVIGQVWLANKSFGTVPAKVDRAITNVVMMGMGEPLLNFDNVIAA 182
           CST +QGFN NL  +E+IGQVW A +  G       R ITNVVMMGMGEPLLN  N+I A
Sbjct: 121 CSTAQQGFNRNLRVSEIIGQVWRAAREIGLEKETGRRPITNVVMMGMGEPLLNMKNLIPA 180

Query: 183 MKIMMDDLGYGISKRRVTLSTSGVVPMIDELAKHIDVSLALSLHAPNDELRNKLVPINKK 242
           ++IM+DDLG+G+SKRRVT+STSGVV  ++++   IDV+LA+SLHAPND+LR++++PIN +
Sbjct: 181 LEIMLDDLGFGLSKRRVTVSTSGVVSGLEQMIGQIDVALAISLHAPNDKLRSEIMPINDR 240

Query: 243 YPLKVLLESCMGYMSTLGGKR-VLTVEYTLLKDVNDQPEHAAQMIELLRDVPCKINLIPF 301
           + ++  LE    Y+++    R  +TVEY LL  VND  EHA ++ ELL+  PCKINLIPF
Sbjct: 241 WNIEAFLEVVRRYIASSNANRGKVTVEYVLLDHVNDGTEHAHELAELLKGTPCKINLIPF 300

Query: 302 NPFPHSGYERPSNNAIRRFQDLLHHGGFNVTTRTTRGDDIDAACGQLVGQVNDRTRRSE 360
           NP+P S Y++PSN+ I RFQ  L      VT R TRGDDIDAACGQLVG V DRT+R++
Sbjct: 301 NPYPGSPYKKPSNSRIDRFQKTLMQYEHTVTIRKTRGDDIDAACGQLVGDVIDRTKRTK 359