Pairwise Alignments

Query, 381 a.a., Dual-specificity RNA methyltransferase RlmN from Pseudomonas putida KT2440

Subject, 361 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

 Score =  249 bits (635), Expect = 1e-70
 Identities = 140/353 (39%), Positives = 207/353 (58%), Gaps = 19/353 (5%)

Query: 3   TSTGKINLLGLTQPEMEQFFDSIGEKRFRAGQVMKWIHHFGVSDFAAMTNVGKVLREKLE 62
           T T    LLG + PE++ +  + G+  +RA Q+ +W++   + + A ++   K  R+ L+
Sbjct: 10  TVTDATPLLGRSLPELQDWVVAQGQPSYRAKQLYQWLYERSIHNLAEISVFPKAWRQSLQ 69

Query: 63  AVAEIRPPEVVSEDISADGTRKWVIRVASGSCVETVYIPTDDRGTLCVSSQAGCALDCSF 122
           AV   R  ++V   +S  GT K+++R+  G  +E V IP+ DR T+CVSSQ GCA+ C F
Sbjct: 70  AVPVGRS-QIVDRSVSPSGTIKYLLRLHDGEIIEAVGIPSGDRLTVCVSSQLGCAMACDF 128

Query: 123 CSTGKQGFNSNLTAAEVIGQVWLANKSFGTVPAKVDRAITNVVMMGMGEPLLNFDNVIAA 182
           C+TGK GF  +L   E+I QV        TV     + ++N+V MGMGEPLLN D V+AA
Sbjct: 129 CATGKGGFRRHLAPHEIIDQVL-------TVQEDWQQRVSNIVFMGMGEPLLNLDAVLAA 181

Query: 183 MKIMMDDLGYGISKRRVTLSTSGVVPMIDELA-------KHIDVSLALSLHAPNDELRNK 235
           ++ +  D+G G  +R +T+ST G+   I  LA       + +  +LA+SLHAPN  +R++
Sbjct: 182 IRCLNQDIGIG--QRGITVSTVGIPGHIRRLAETKRVGDRPLQFTLAVSLHAPNQAIRDR 239

Query: 236 LVPINKKYPLKVLLESCMGYMSTLGGKRVLTVEYTLLKDVNDQPEHAAQMIELLRDVPCK 295
           L+P ++ YP+  LL+ C  Y+   G  R +T EY LL  +NDQPE A Q+ +LLR     
Sbjct: 240 LIPSSRHYPITDLLQECRDYVQITG--RRVTFEYILLAGLNDQPEQAEQLAQLLRGFQSH 297

Query: 296 INLIPFNPFPHSGYERPSNNAIRRFQDLLHHGGFNVTTRTTRGDDIDAACGQL 348
           +NLIP+NP     Y+RPS   +  F D L      VT R ++G   DAACGQL
Sbjct: 298 VNLIPYNPIDEVEYQRPSKARVDAFADALRQQRVAVTVRWSKGLGADAACGQL 350