Pairwise Alignments

Query, 620 a.a., Sec Translocation Complex SecD subunit from Pseudomonas putida KT2440

Subject, 464 a.a., preprotein translocase subunit SecD from Synechococcus elongatus PCC 7942

 Score =  234 bits (597), Expect = 6e-66
 Identities = 156/439 (35%), Positives = 237/439 (53%), Gaps = 54/439 (12%)

Query: 209 NELAVLRLALTQAKVAEIREYSIKQNLTTVRNRVNELGVAEPLVQRQGANRIVVELPGVQ 268
           ++L +L    T+      RE    Q +  + NRVN LGV+E ++Q  G+++I+V+LPGV 
Sbjct: 37  SQLTILVKPTTEIPSVGDRELEAVQRV--IENRVNGLGVSEAVIQTAGSDKILVQLPGVS 94

Query: 269 DTAEAKRILGKTANLEFRFGAEPGASKATTEVFEFREGGRSA------------------ 310
           +  +A+R+LG TA LEFR    PG     T + +     R A                  
Sbjct: 95  NPEQAERVLGGTAQLEFR-EQNPGTEAQVTPLQQLVSQARGALEIERRNGDPTKVAELEQ 153

Query: 311 AVERGLI----------ITGDQVTDAQASFDEHGRP-QVNIRLDGHGGELMSRATRSNVG 359
            +ER  +          ITG  + DA A   + G   +V +R D  GG+  +  T++  G
Sbjct: 154 TLERSQVELAKFFGPAQITGKSLKDALAQPTQTGNTWEVALRFDTEGGDQFAALTKNLAG 213

Query: 360 RSMAV-IFIEQKPVTRYVKQAVGGVEKDVAVQSFVEEKKIISLATIQSPLGSQFRITGLN 418
              ++ IF++   ++  V   VG       +                   G    ITG  
Sbjct: 214 TGRSIGIFLDGVLISAPV---VGPEFAQTGIT------------------GGSAVITGRF 252

Query: 419 GQGESSELALLLRAGGLAAPMYFAEERTIGPSLGADNITKGIDASLWGMLFVSLFIIAIY 478
              ++ +LA+ LR G L  P+   E RT+G +LG D+I + I A + G+L V +F++A Y
Sbjct: 253 TTEQAEDLAIQLRGGALPLPVEIVENRTVGATLGRDSIQRSIYAGIGGLLLVLIFMVAYY 312

Query: 479 RAFGVLATIALAGNMVLLLALMSLLGATLTLPGIAGIVLTMGMAVDANVLIFSRIREEIA 538
           +  G++A I+LA   +L LA   LLG TLTLPGIAG +L++GMAVDANVLIF R REE+ 
Sbjct: 313 QLPGLIADISLAIYALLSLAAFDLLGVTLTLPGIAGFLLSIGMAVDANVLIFERTREELR 372

Query: 539 AGMSVQRAIHEGFNRAYSAIVDANLTTLLVGGILFAMGTGPVKGFAVTMSLGIFTSMFTA 598
           AG S+ R++  GF RA+S+I+D+N+TTL+  G LF + +G VKGFA+T+++G+  SMFTA
Sbjct: 373 AGKSLYRSVESGFYRAFSSILDSNVTTLIACGALFWLSSGLVKGFALTLAIGVMVSMFTA 432

Query: 599 VMVTRALVNLTCGGRDIKK 617
           +  +R L+ L      ++K
Sbjct: 433 ITCSRTLMFLAIAYPALRK 451