Pairwise Alignments

Query, 620 a.a., Sec Translocation Complex SecD subunit from Pseudomonas putida KT2440

Subject, 844 a.a., preprotein translocase subunit SecD/SecF from Sinorhizobium meliloti 1021

 Score =  300 bits (768), Expect = 2e-85
 Identities = 183/515 (35%), Positives = 286/515 (55%), Gaps = 50/515 (9%)

Query: 122 PMKLGLDLSGGVHFLLEVDMDKAMTARMKVYEGEVKTLLRKERVRYRSLPQQDGGIMLGF 181
           P+ LGLDL GG H +LEVD      AR+     + + +LR ERV   S       + +  
Sbjct: 43  PVTLGLDLRGGSHLVLEVDGAGLQKARLNSLLDDTRRVLRGERVSASSARISGNSVTVSI 102

Query: 182 ADDATREQARALIRKNFN------------DFDLTTTDRNELAVLRLALTQAKVAEIREY 229
            D   R++    +++               + ++TT       V+ LA+T+A +A+    
Sbjct: 103 PDAQDRDKVLPKLQELATPVSTVGFAAPAPEVEVTTAGD----VITLAMTEAGLADRMTK 158

Query: 230 SIKQNLTTVRNRVNELGVAEPLVQRQGANRIVVELPGVQDTAEAKRILGKTANLEFRFGA 289
           +++Q+L  +RNRV+++GVAEPL+QR G+NRI+V+LPG+QD    + +LG TA + F    
Sbjct: 159 AVEQSLEIIRNRVDQVGVAEPLIQRIGSNRILVQLPGLQDPTRLRELLGSTAQMSFHMLD 218

Query: 290 E----PGASKATTEVFEFREGGRSAAVERGLIITGDQVTDAQASFDEH-GRPQVNIRLDG 344
           +       +    ++      G    VE  + I+G+++ DA+  FD+   +P V+   D 
Sbjct: 219 QSVDVTQPAPRGVDILPGANDGNRYPVESRVAISGERLDDAKVGFDQRTNQPVVDFSFDS 278

Query: 345 HGGELMSRATRSNVGRSMAVIFIEQKPVTRYVKQAVGGVEKDVAVQSFVEEKKIISLATI 404
            G    +  TR NVGR  A++                             + K+++   I
Sbjct: 279 LGARQFADITRENVGRPFAIVL----------------------------DGKVLTAPVI 310

Query: 405 QSP-LGSQFRITGLNGQGESSELALLLRAGGLAAPMYFAEERTIGPSLGADNITKGIDAS 463
             P LG + +I+G     E++ L+ LLR+G L AP+   EER++GP+LG+D+I  G+   
Sbjct: 311 NEPILGGRGQISGSFTVEEATVLSALLRSGALPAPLTIIEERSVGPNLGSDSIRMGLFTG 370

Query: 464 LWGMLFVSLFIIAIYRAFGVLATIALAGNMVLLLALMSLLGATLTLPGIAGIVLTMGMAV 523
           L G   V + ++ +Y A+G++A + L  + ++ + ++ L+G+TLTLPGIAGI+L +GMAV
Sbjct: 371 LAGFGLVVVLMVVLYGAWGMIANVGLVLHTIMTIGVLGLIGSTLTLPGIAGIILGIGMAV 430

Query: 524 DANVLIFSRIREEIAAGMSVQRAIHEGFNRAYSAIVDANLTTLLVGGILFAMGTGPVKGF 583
           DAN+LI +RIREE  AG    +A+  GFN+AY+ I+D+N+TTL    +LF  G+GPVKGF
Sbjct: 431 DANILINARIREETEAGAGAMKALDIGFNKAYATIIDSNVTTLAGTVLLFWFGSGPVKGF 490

Query: 584 AVTMSLGIFTSMFTAVMVTRALVNLTCGGRDIKKL 618
           AVTM LGI  SMFT+V V R L+      R +KKL
Sbjct: 491 AVTMMLGIGISMFTSVTVVRLLMREVVVRRKMKKL 525