Pairwise Alignments

Query, 620 a.a., Sec Translocation Complex SecD subunit from Pseudomonas putida KT2440

Subject, 858 a.a., preprotein translocase subunit SecD/SecF from Sinorhizobium meliloti 1021

 Score =  233 bits (595), Expect = 2e-65
 Identities = 158/518 (30%), Positives = 261/518 (50%), Gaps = 54/518 (10%)

Query: 112 PQWLRNLGASPMKLGLDLSGGVHFLLEVDMDKAMTARMKVYEGEVKTLLRKERVRYRSLP 171
           P WL +     + LGLDL GG H +L+V  +  +  R++     +   LR+  +RY  L 
Sbjct: 37  PTWLPH---RQVPLGLDLRGGSHIVLKVSREDIVAERLQSTIDTIADALRQADIRYTGLS 93

Query: 172 QQDGGIMLGFAD----DATREQARALIRK-------NFNDFDLTTTDRNELAVLRLALTQ 220
               G+     D     A R+  +AL+           +  +L   +      LRL LT 
Sbjct: 94  GSGQGLQFRLRDATKAPAARDALKALVAPVRQGGLFGNSIQELVYEESATSDTLRLRLTD 153

Query: 221 AKVAEIREYSIKQNLTTVRNRVNELGVAEPLVQRQGANRIVVELPGVQDTAEAKRILGKT 280
             +      ++ Q++  VR RV E+    P+++R+G +R+ V++PG+ +    K +LG+ 
Sbjct: 154 EGIDLRVSDAVAQSIEVVRRRVGEVIAVVPIIERRGGDRLSVQVPGLDEPQRLKDLLGQR 213

Query: 281 ANLEFRF--GAEPGASKATTE-------VFEFREGGRSAAVERGLIITGDQVTDAQASFD 331
            ++  ++   + P      T        ++   +      VER          +AQ  FD
Sbjct: 214 GDVALKWLDSSMPAQQAVDTRPPAGSEVLYSLDDPPIPYLVERRAFAAAPDFVEAQPGFD 273

Query: 332 EH-GRPQVNIRLDGHGGELMSRATRSNVGRSMAVIFIEQKPVTRYVKQAVGGVEKDVAVQ 390
                P VN R+       ++   +S+  +  A++                         
Sbjct: 274 PATSEPVVNARIAAGAAARVAPFLQSDPRKQFAIVL------------------------ 309

Query: 391 SFVEEKKIISLATIQSPL-GSQFRITGLNGQGESSELALLLRAGGLAAPMYFAEERTIGP 449
               + ++IS + +   L G   RI+G   +  +++LA L+RAG L   +   EERT+GP
Sbjct: 310 ----DGQVISTSVLDGALSGDAVRISGNLSEDGANDLAALMRAGPLPVSLTVIEERTVGP 365

Query: 450 SLGADNITKGIDASLWGMLFVSLFIIAIYRAFGVLATIALAGNMVLLLALMSLLGATLTL 509
             GAD +  G+ A L   + V+  +I  Y  FGV+A IA+  N+VL++A++S+ GATLTL
Sbjct: 366 EDGADAVANGLTAGLIAAIAVAACMIGFYGFFGVVAVIAVIVNVVLIIAVLSVTGATLTL 425

Query: 510 PGIAGIVLTMGMAVDANVLIFSRIREEI-AAGMSVQRAIHEGFNRAYSAIVDANLTTLLV 568
           PGIAGI+LT+G+AVD+NVLI+ R+REE   +G  ++RA+ +GF R   +IVDANLT  + 
Sbjct: 426 PGIAGIILTIGIAVDSNVLIYERLREEARTSGKPLRRALDDGFERVLRSIVDANLTIFIA 485

Query: 569 GGILFAMGTGPVKGFAVTMSLGIFTSMFTAVMVTRALV 606
           G IL  +G+G ++GFAVT+++G  T++ TA  +TR L+
Sbjct: 486 GAILLYLGSGAIRGFAVTLAIGSVTTILTAHSLTRRLI 523