Pairwise Alignments

Query, 620 a.a., Sec Translocation Complex SecD subunit from Pseudomonas putida KT2440

Subject, 553 a.a., protein-export membrane protein SecD from Phaeobacter inhibens DSM 17395

 Score =  328 bits (841), Expect = 4e-94
 Identities = 219/619 (35%), Positives = 315/619 (50%), Gaps = 104/619 (16%)

Query: 7   LWKYALIVLVLVVGFIYSAPNLYPDDPAVQISGASSALQVNQADLDRVSKALVDAKIAVK 66
           LWK  LI LV V G + + PN +           +   Q N A  + ++K    A++ V 
Sbjct: 6   LWKRVLIWLVCVTGLLLALPNAF----------YTRVEQANDAAAEIITKGESPARLDVA 55

Query: 67  GASLGEKGSGLIRLTNQEDQLPAKDVVRKALGDDYVVALNLAQTTPQWLRNLGASPMKLG 126
           G                                             QW   + +S + LG
Sbjct: 56  G---------------------------------------------QWPSFMPSSLVNLG 70

Query: 127 LDLSGGVHFLLEVDMDKAMTARMKVYEGEVKTLLRKERVRYRSLPQQ---DGGIMLGFAD 183
           LDL GG H L EV +     ARM     EV+  LR ER    +  +Q   +G I L  + 
Sbjct: 71  LDLRGGAHLLAEVKVADVYGARMDALWPEVRDALRPERGEVGTFRRQQAPEGQIRLKISK 130

Query: 184 DATREQARALIRKNFNDF---------DLTTTDRNELAVLRLALTQAKVAEIREYSIKQN 234
                +A A++R   N           D+T +   ++  + L+  +   ++ R  +++Q 
Sbjct: 131 PEGMARALAVVRGLANPITSLTGAGATDITVSGTGDILTVELSEQEKLASDDR--TVRQA 188

Query: 235 LTTVRNRVNELGVAEPLVQRQGANRIVVELPGVQDTAEAKRILGKTANLEFR------FG 288
           L  +R R++E+G  EP +QRQG++RI++++PG+   +E K I+G TA L F         
Sbjct: 189 LEIIRRRIDEVGTREPTIQRQGSDRILIQVPGIGSASELKEIIGTTAQLTFNPVVGRGTD 248

Query: 289 AEPGASKATTEVFEFREGGRSAAVERGLIITGDQVTDAQASFDEHGRPQVNIRLDGHGGE 348
           A+  A      V    E G    VE   ++TG+++ DAQ SFD++GRP V+ R +  G  
Sbjct: 249 ADANAGVGNKVVPSLDEDGVFYTVEAAPVVTGEELVDAQPSFDQNGRPAVSFRFNTTGAR 308

Query: 349 LMSRATRSNVGRSMAVIFIEQKPVTRYVKQAVGGVEKDVAVQSFVEEKKIISLATIQSPL 408
                T  N+G   A++                             +++++S   IQS +
Sbjct: 309 KFGDYTAENIGSPFAIVL----------------------------DEEVVSAPVIQSHI 340

Query: 409 -GSQFRITGLNGQGESSELALLLRAGGLAAPMYFAEERTIGPSLGADNITKGIDASLWGM 467
            G    ITG     ES+ +A+LLRAG L A + F EERTIGP LG D+I  G  A++   
Sbjct: 341 PGGSGIITGNFTIEESTNMAILLRAGALPAGLEFLEERTIGPELGQDSIDAGKVATIVAF 400

Query: 468 LFVSLFIIAIYRAFGVLATIALAGNMVLLLALMSLLGATLTLPGIAGIVLTMGMAVDANV 527
           + V +F+   Y  FGV A IAL  N+ L+   +SL+GATLTLPGIAGIVLT+GMAVDANV
Sbjct: 401 VGVLVFMALSYGLFGVFANIALILNIALIFGALSLIGATLTLPGIAGIVLTVGMAVDANV 460

Query: 528 LIFSRIREEIAAGMSVQRAIHEGFNRAYSAIVDANLTTLLVGGILFAMGTGPVKGFAVTM 587
           LIF RIREE+ AG    RAI EG+++A SAI+DAN+TT +   ILFAMG+GPV+GFA+T+
Sbjct: 461 LIFERIREELKAGRGPARAIDEGYSKALSAILDANITTFITAVILFAMGSGPVRGFAITL 520

Query: 588 SLGIFTSMFTAVMVTRALV 606
            LGI TS+FTA+ VTR ++
Sbjct: 521 GLGIMTSVFTAIFVTRVII 539