Pairwise Alignments

Query, 620 a.a., Sec Translocation Complex SecD subunit from Pseudomonas putida KT2440

Subject, 622 a.a., protein-export membrane protein, SecD/SecF family from Dechlorosoma suillum PS

 Score =  503 bits (1295), Expect = e-146
 Identities = 286/635 (45%), Positives = 412/635 (64%), Gaps = 48/635 (7%)

Query: 2   LNKYPLWKYALIVLVLVVGFIYSAPNLYPDDPAVQISGASSALQVNQADLDRVSKALVDA 61
           +N+YPLWKY  +V+ LV+GF+Y+ PN + + PAVQ+S A + L+ +   L RV  AL  A
Sbjct: 1   MNRYPLWKYITVVVALVIGFLYTLPNFFGEAPAVQLSPARATLKTDAQLLSRVEAALQGA 60

Query: 62  KIAVKGASLGEKGSGLIRLTNQEDQLPAKDVVRKALGDD-----YVVALNLAQTTPQWLR 116
            I+  G  L   G    R  + + QL  KD++ K    +     YVVALNL  ++P+WL 
Sbjct: 61  GISHDGIFLDSNGVKT-RFKDTDTQLKVKDLLEKTFNPNPQDAQYVVALNLLSSSPKWLS 119

Query: 117 NLGASPMKLGLDLSGGVHFLLEVDMDKAMTARMKVYEGEVKTLLRKERVRYRSLPQQDGG 176
           NLGA PM LGLDL GGVHFLL+VDM  A+T R+     +++TLLR + +R+  + ++   
Sbjct: 120 NLGALPMYLGLDLRGGVHFLLQVDMAGALTKRLDSMSADLRTLLRDKNLRHAGINREGNA 179

Query: 177 IMLGFADDATREQARALIRKNFNDFDLTTTDRNELAVLRL--ALTQAKVAEIREYSIKQN 234
           +++ F D  TR +AR ++  N    DLT  D  + + L+L  +L    V  I+++++KQN
Sbjct: 180 VVVKFRDADTRTKARIVLEDN--QPDLTFVDGQDGSDLKLTASLKPTAVKRIQDFALKQN 237

Query: 235 LTTVRNRVNELGVAEPLVQRQGANRIVVELPGVQDTAEAKRILGKTANLEFRFGAE-PGA 293
           +TT+ NR+NELGVAEP++Q+QGA+RIVV+LPGVQDTA+AK ILG+TA LE R   + PGA
Sbjct: 238 ITTLHNRINELGVAEPVIQQQGADRIVVQLPGVQDTAKAKDILGRTATLEIRMVDDTPGA 297

Query: 294 SKAT--------TEVFEFREGGRSAAVERGLIITGDQVTDAQASFD-EHGRPQVNIRLDG 344
            +A         TE++  R GG    V++ +++TGD++TDAQ  FD +   P V++ LD 
Sbjct: 298 LEAAMAGQAPFGTELYSER-GGSPLLVKKQVVLTGDRLTDAQPGFDGQTHEPAVHLTLDS 356

Query: 345 HGGELMSRATRSNVGRSMAVIFIEQKPVTRYVKQAVGGVEKDVAVQSFVEEKKIISLATI 404
            G  +    TR NVG+ MA++ IE+                         + ++++   I
Sbjct: 357 AGARIFKDITRENVGKRMAILLIEKG------------------------KGEVVTAPVI 392

Query: 405 QSPLGS-QFRITGLNGQGESSELALLLRAGGLAAPMYFAEERTIGPSLGADNITKGIDAS 463
           ++ +G  + +I+G     E+++ ALLLRAG LAAPM   EERTIGPSLGADNI+KG  ++
Sbjct: 393 RTEIGGGRVQISGKMSTMEANDTALLLRAGSLAAPMDIVEERTIGPSLGADNISKGFHST 452

Query: 464 LWGMLFVSLFIIAIYRAFGVLATIALAGNMVLLLALMSLLGATLTLPGIAGIVLTMGMAV 523
           LWG L ++ F++  Y  FG+++T+ALA N++ L+AL+SL+ ATLTLPGIA I LT+GMA+
Sbjct: 453 LWGFLAIAAFMMCYYLMFGLISTLALAANLMFLVALLSLMQATLTLPGIAAIALTLGMAI 512

Query: 524 DANVLIFSRIREEIAAGMSVQRAIHEGFNRAYSAIVDANLTTLLVGGILFAMGTGPVKGF 583
           D+NVLI  R+REE+  G S Q AI  G+ RA+  I+D+N+TTL+ G  L A G+GP++GF
Sbjct: 513 DSNVLINERVREELRNGASPQAAISAGYERAFGTILDSNVTTLIAGVALLAFGSGPIRGF 572

Query: 584 AVTMSLGIFTSMFTAVMVTRALVNLTCGGRDIKKL 618
           AV   LGI TSMF++V+V+RALVNL  G R  KKL
Sbjct: 573 AVVHCLGILTSMFSSVVVSRALVNLIYGRR--KKL 605