Pairwise Alignments

Query, 620 a.a., Sec Translocation Complex SecD subunit from Pseudomonas putida KT2440

Subject, 315 a.a., preprotein translocase subunit SecF (RefSeq) from Shewanella sp. ANA-3

 Score = 59.3 bits (142), Expect = 2e-13
 Identities = 40/164 (24%), Positives = 80/164 (48%), Gaps = 7/164 (4%)

Query: 447 IGPSLGADNITKGIDASLWGMLFVSLFIIAIYR---AFGVLATIALAGNMVLLLALMSLL 503
           +GP +G +   +G  A L  ++ + +++   +    AFG +A  ALA ++++ L + S+ 
Sbjct: 126 VGPQVGKELAEQGGLAVLVALICIMIYVSFRFEWRLAFGSVA--ALAHDVIVTLGVFSVF 183

Query: 504 GATLTLPGIAGIVLTMGMAVDANVLIFSRIREEI--AAGMSVQRAIHEGFNRAYSAIVDA 561
                L  +AG++  +G +++  +++F RIRE          +  ++    +  S  +  
Sbjct: 184 QLEFDLTVLAGVLTVVGYSLNDTIVVFDRIRENFLKMRKSEPEEVVNVSITQTMSRTIIT 243

Query: 562 NLTTLLVGGILFAMGTGPVKGFAVTMSLGIFTSMFTAVMVTRAL 605
             TTL+    LF  G   + GFA  + LGIF   ++++ V   L
Sbjct: 244 TGTTLVTVVALFLKGGTMIHGFATALLLGIFVGTYSSIYVASYL 287