Pairwise Alignments

Query, 672 a.a., cytochrome bo terminal oxidase subunit I from Pseudomonas putida KT2440

Subject, 541 a.a., Cytochrome-c oxidase from Synechococcus elongatus PCC 7942

 Score =  374 bits (959), Expect = e-108
 Identities = 203/513 (39%), Positives = 302/513 (58%), Gaps = 18/513 (3%)

Query: 45  WSEWLT-TVDHKKIGVMYIIVAMVMLLRGFADAIMMRTQLAAATGGSEGYLPPEHYDQIF 103
           W E+ + + DHK IG+ Y+++  +  L G A A  +R +LA  T      +  + Y+Q+F
Sbjct: 21  WREYFSFSTDHKVIGIQYLVLTFIFYLIGGALATAVRLELATPT---VDVVSRDLYNQLF 77

Query: 104 TAHGVIMIIFMAMPFFTGLM-NLAVPLQIGARDVAFPFLNSLSFYLLL-AGVLLVNISLG 161
           T H  +MI    +P  +G   N  +PL IGARD+AFP LN+++F+LL  AG+LL+   L 
Sbjct: 78  TVHATVMIFLWIVPAGSGAFGNYLIPLLIGARDMAFPKLNAVAFWLLPPAGILLIASFLV 137

Query: 162 VGEFAKTGWVAYPPLAGIQYSPGVGVDYYIWALQLSGLGTT--LTGVNFLVTVMKMRAPG 219
             E   +GW +YPPL+ +    G      IW L +  LGT+  L  +NF  T++KMR PG
Sbjct: 138 --EAPSSGWTSYPPLSLMSGKTGE----MIWILSVLLLGTSSILGAINFATTIIKMRRPG 191

Query: 220 MKLMDMPIFTWTCTWANVLIVASFPILTAALALLTVDRYLDFHIFTNELGGNPMMYVNLF 279
           +    MP+F W     +++ + S P+L  AL LL+ D  +  + F    GGNP++Y +LF
Sbjct: 192 LGWNQMPLFCWAMLSTSIMAILSTPVLAGALILLSFDLMVGTNFFNPLGGGNPVVYQHLF 251

Query: 280 WAWGHPEVYILILPAFGVFSEVTSTFSGKRLFGHHSMIYASGAIAILGFAVWLHHFFTMG 339
           W + HP VYI+ILP FG+ SE+    + K +FG+ ++ Y+S AI  L   VW HH FT G
Sbjct: 252 WFYSHPAVYIMILPVFGMISEILPVHARKPIFGYQAIAYSSLAITFLSLIVWAHHMFTSG 311

Query: 340 AGASVNTFFGLATMLISIPTGVKLFNWLFTMYQGRVRFTAPMLWTLGFMVTFSIGGMTGV 399
               +  FF +ATM+I++PTG+K+F+WL T++ G+++ T+ +L+++GF+  F IGG++G+
Sbjct: 312 TPPWLRMFFMIATMIIAVPTGIKVFSWLATLWGGKLQLTSALLFSVGFISMFVIGGLSGI 371

Query: 400 LLAVPGADFVLHNSLFVIAHFHNVIIGGAVFGYIAGFAFWFPKAFGFTLNEKWGKAAFWF 459
           +LA    D  +H++ FV+AHFH V+ GG+VFG  AG   WFPK  G  LNE WGK  F  
Sbjct: 372 MLASVPVDIHVHDTYFVVAHFHYVLFGGSVFGLYAGIYHWFPKMTGRLLNEGWGKVHFIL 431

Query: 460 WLSGFYVAFMPLYALGFMGMTRRLNHSDNPLWEPYLYVAVVGAVLILFGIACQLIQIVVS 519
            L GF + F+P++ LG  GM RR+   D P +     +  +G+ ++       LI  V S
Sbjct: 432 TLVGFNLCFLPMHWLGLQGMPRRVAEYD-PQFATVNLICSIGSFILAISTIPFLINAVWS 490

Query: 520 VRDRNQNLDVTGDPWGGRTLEWSTSSPPPFYNF 552
                       +PWGG T EW TSSPPP  N+
Sbjct: 491 ---WIAGAKAGPNPWGGITPEWLTSSPPPVENW 520