Pairwise Alignments

Query, 313 a.a., cytochrome bo terminal oxidase subunit II from Pseudomonas putida KT2440

Subject, 315 a.a., cytochrome c oxidase subunit II from Synechococcus elongatus PCC 7942

 Score = 50.4 bits (119), Expect = 5e-11
 Identities = 43/233 (18%), Positives = 89/233 (38%), Gaps = 46/233 (19%)

Query: 42  LILIATGLMLLVVIPVIIMTLAFAWKYRASNKAATYTPDWSHSTKIEAAVWIIPILIIIA 101
           ++ IATGL LLV   + ++     W++R      T       +  +E     IP++I++ 
Sbjct: 48  MMTIATGLFLLVQGLIFVIL----WRFRRKPNDVTDAAPIHGNLALEILWTGIPVVIVLG 103

Query: 102 LGYVTY------------HSTHKLDPYRPLDSDVKP------------------------ 125
           L   ++            H    +   +P DS +                          
Sbjct: 104 LSVYSFSVYTTMGGLSVGHGGGHMAHAQPRDSAIAAELSSDSLQDSKSTPRVSAGLGAPT 163

Query: 126 -----IQIDVVALDWKWLFIYPEQGIATVNKIVFPANTPVNFRVTSDAVMNSFFIPGLGG 180
                + ++V  L + W+F YP   +    ++  P    V   + +  V+++F++P    
Sbjct: 164 EALPDVTVNVKGLQFAWIFNYPSHNLIA-GELHLPLGKSVQLEIEAQDVIHAFWVPQFRL 222

Query: 181 QIYAMAGMTTKLHLIANENGEFDGISANYSGAGFTGMKFKATATSQEDFDKWV 233
           +  A+ G  T+L     + G +  + A   G+    M+ +    + ED+D+W+
Sbjct: 223 KQDAIPGERTRLQFTPTQLGTYPIVCAELCGSYHGAMRSQVIVETPEDYDRWI 275