Pairwise Alignments

Query, 518 a.a., DNA-binding transcriptional dual regulator (NO) from Pseudomonas putida KT2440

Subject, 509 a.a., Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains from Pseudomonas stutzeri RCH2

 Score =  480 bits (1236), Expect = e-140
 Identities = 268/511 (52%), Positives = 342/511 (66%), Gaps = 13/511 (2%)

Query: 13  LVSDLSRDLPDQERYRRLLQAMRGLLPCDAAALLRLDGEWLVPLAVDGLSPDTLGRRFRV 72
           L++DL+ +LP+  R +RL+  ++    C A  LLRLD + L PLA  GL  + LGRRF +
Sbjct: 7   LLADLTTELPNAVRLQRLVHTLQQRFRCGAVVLLRLDEDSLRPLAAVGLVQEALGRRFVI 66

Query: 73  SEHPRFQILLSRPEPTRFASDSELPDPYDGLVNAPDAD-LEVHDCMGCPLMVDERPWGLV 131
           ++HPR   +LS+ EPT F  DS LPDPYDGL++A   + L VHDCMG  L V+ + WG +
Sbjct: 67  AQHPRLAAILSQREPTWFEPDSRLPDPYDGLLDAHIGEPLPVHDCMGVSLYVEGKLWGAL 126

Query: 132 TLDALTPGQFQSLELDALQAFASLAAATVTVAERIEH----LALRAEDEHHRAELYRQAS 187
           TLDAL  G F       LQ +  +  A V V  R+EH    L L   D      +     
Sbjct: 127 TLDALHAGTFDDDARRDLQRYTLVIEAAVRVT-RLEHENRGLRLARSDV-----METTLD 180

Query: 188 GQDRELIGQSPAHKRLVEEIRLVGSSDLTVLITGETGVGKELVAQALHRASSRADKPLVS 247
             D E++GQS   + L+ E+++V  S+L VL+ GETGVGKEL A+ LHR S R +KPLV 
Sbjct: 181 HGDGEILGQSDVIRELLRELQVVADSELPVLLLGETGVGKELFARWLHRHSRRRNKPLVH 240

Query: 248 LNCAALPDTLVESELFGHVRGAFTGAHGERRGKFELANGGTLFLDEVGELPLTVQAKLLR 307
           +NCAALP++L ESELFGHV+GAF+GA  +R G+F+ ANGGTL LDEVGELPLTVQAKLLR
Sbjct: 241 VNCAALPESLAESELFGHVKGAFSGATTDRPGRFDAANGGTLLLDEVGELPLTVQAKLLR 300

Query: 308 VLQSGQLQRLGSDREHRVDVRLIAATNRDLAAEVRTGNFRADFYHRLSVYPLHVPPLRER 367
            LQ+G++QRLG+D+  +VDVR+IAATNR+L   VR G+FRAD YHRLSVYP  +PPLRER
Sbjct: 301 TLQNGEIQRLGADKPRQVDVRIIAATNRNLRESVRDGHFRADLYHRLSVYPAPIPPLRER 360

Query: 368 GRDVLLLAGYFLEQNRSRLGLNSLRLSHEAQAALIAYDWPGNVRELEHLIGRSALKALGQ 427
           G DVL+LAG+FLE NR+RLGL S+RLS  A+ AL+ Y WPGNVRELEH++ R+AL+ L +
Sbjct: 361 GNDVLILAGHFLELNRARLGLRSMRLSPAAERALLGYSWPGNVRELEHVVSRAALRLLSR 420

Query: 428 HPDRPRILTLEAIDLDLRVSATTPGTLPSPAAPLQVVTPPEGGLREAVDSYQRQVIEACL 487
              R  ILTLE   LDL   A   G   S      V+      LR  VD+ QRQ I   L
Sbjct: 421 GASRSEILTLEPDLLDLDSHAV--GVTASQVVEEPVIADEVLPLRHTVDAAQRQAIVRAL 478

Query: 488 QRHQDNWAAAARELGLDRANLSRLARRLGLR 518
           +   +NWA AAR L +D +NL +LARRL L+
Sbjct: 479 EASGENWAQAARLLDVDPSNLHKLARRLKLK 509