Pairwise Alignments

Query, 518 a.a., DNA-binding transcriptional dual regulator (NO) from Pseudomonas putida KT2440

Subject, 584 a.a., nif-specific transcriptional activator NifA from Rhodopseudomonas palustris CGA009

 Score =  240 bits (613), Expect = 9e-68
 Identities = 130/322 (40%), Positives = 201/322 (62%), Gaps = 14/322 (4%)

Query: 117 MGCPLMVDERPWGLVTLDALTPGQFQSLELDALQAFASLAAATVTVAERIEHLALRAED- 175
           +G P+ +D R  G +++D +  G+     +DA   F ++ A  +    ++  +  R  + 
Sbjct: 142 IGVPIRIDSRVVGTLSIDRVRDGR-SHFRMDADVRFLTMVANLIGQTVKLHRVVARDRER 200

Query: 176 ---EHHRAELYRQASGQDRE--------LIGQSPAHKRLVEEIRLVGSSDLTVLITGETG 224
              E HR +        +RE        ++G+SPA ++L+ ++ ++  S   VL+ GE+G
Sbjct: 201 LMAESHRLQKELSELKPERERKRVKVDGIVGESPAIRKLLAKVSIIAKSQSPVLLRGESG 260

Query: 225 VGKELVAQALHRASSRADKPLVSLNCAALPDTLVESELFGHVRGAFTGAHGERRGKFELA 284
            GKEL+A+A+H  S+RA+ P + +NCAALP++++ESELFGH +GAFTGA   R+G+FELA
Sbjct: 261 TGKELIAKAIHELSARANGPFIKINCAALPESVLESELFGHEKGAFTGAIASRKGRFELA 320

Query: 285 NGGTLFLDEVGELPLTVQAKLLRVLQSGQLQRLGSDREHRVDVRLIAATNRDLAAEVRTG 344
           + GTLFLDE+GE+  + QAKLLRVLQ  + +R+G ++  +V+VR++AATNR+L   V   
Sbjct: 321 DKGTLFLDEIGEISASFQAKLLRVLQEQEFERVGGNQTIKVNVRIVAATNRNLEEAVARK 380

Query: 345 NFRADFYHRLSVYPLHVPPLRERGRDVLLLAGYFLEQNRSRLGLNSLRLSHEAQAALIAY 404
            FRAD Y+R++V P+ +PPLR+R  D+ LLA  FL+      G   L     A   L A 
Sbjct: 381 EFRADLYYRINVVPMILPPLRDRPSDIPLLASEFLKNFNKENG-RELAFESHALDLLKAC 439

Query: 405 DWPGNVRELEHLIGRSALKALG 426
            +PGNVRELE+ + R+A  A+G
Sbjct: 440 SFPGNVRELENCVRRTATLAMG 461