Pairwise Alignments

Query, 518 a.a., DNA-binding transcriptional dual regulator (NO) from Pseudomonas putida KT2440

Subject, 443 a.a., sigma-54-dependent Fis family transcriptional regulator from Pedobacter sp. GW460-11-11-14-LB5

 Score =  239 bits (611), Expect = 1e-67
 Identities = 134/323 (41%), Positives = 196/323 (60%), Gaps = 17/323 (5%)

Query: 195 GQSPAHKRLVEEIRLVGSSDLTVLITGETGVGKELVAQALHRASSRADKPLVSLNCAALP 254
           G+S    +L E I LV  +D++V+I GE+G GKE  A+ LH+ S RADKP V+++C AL 
Sbjct: 137 GKSAIADKLYEHINLVAPTDMSVIIQGESGTGKEFAARTLHQQSKRADKPFVAIDCGALS 196

Query: 255 DTLVESELFGHVRGAFTGAHGERRGKFELANGGTLFLDEVGELPLTVQAKLLRVLQSGQL 314
             L  SELFGHV+GAFTGA  +++G+FE ANGGTLFLDEVG L   VQ KLLR LQ   +
Sbjct: 197 KDLAASELFGHVKGAFTGALNDKKGQFEAANGGTLFLDEVGNLSYEVQIKLLRALQERVI 256

Query: 315 QRLGSDREHRVDVRLIAATNRDLAAEVRTGNFRADFYHRLSVYPLHVPPLRERGRDVLLL 374
           Q LGS ++  V+VR+I ATN DLA  ++ G FR D YHRL+ + + +PPLR+RG D+ L 
Sbjct: 257 QPLGSTKQIPVNVRIITATNDDLANSMQQGEFREDLYHRLNEFKIQLPPLRDRGGDLELF 316

Query: 375 AGYFLEQNRSRLGLNSLRLSHEAQAALIAYDWPGNVRELEHLIGRSALKALGQHPDRPRI 434
             +F++ +   L  N   +S EA+A L++YDWPGN+REL ++I R  L + G       +
Sbjct: 317 INHFIQLSNRDLERNVKSVSSEAKALLLSYDWPGNLRELSNVIKRMVLLSPGD------V 370

Query: 435 LTLEAIDLDLRVSATTPGTLPSPAAPLQVVTPPEGGLREAVDSYQRQVIEACLQRHQDNW 494
             + A+  ++ +S     + P  ++ L+ V           +  ++ +I   L + + N 
Sbjct: 371 AQINALPDEMMISVHHQ-SAPGNSSDLKAVN----------EQNEKALITETLIKVRHNK 419

Query: 495 AAAARELGLDRANLSRLARRLGL 517
           + AA+ L +DR  L     R G+
Sbjct: 420 SKAAKILNIDRKTLYAKMERYGI 442