Pairwise Alignments

Query, 518 a.a., DNA-binding transcriptional dual regulator (NO) from Pseudomonas putida KT2440

Subject, 471 a.a., nitrogen regulation protein NR(I) (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  243 bits (621), Expect = 8e-69
 Identities = 142/353 (40%), Positives = 206/353 (58%), Gaps = 6/353 (1%)

Query: 170 ALRAEDEHHRAELYRQASGQDRELIGQSPAHKRLVEEIRLVGSSDLTVLITGETGVGKEL 229
           AL    E     + ++   +  E+IG++PA + +   I  +  S ++VLI G++G GKEL
Sbjct: 119 ALTHATEQSPTPVAQETQVKTPEIIGEAPAMQEVFRAIGRLSRSSISVLINGQSGTGKEL 178

Query: 230 VAQALHRASSRADKPLVSLNCAALPDTLVESELFGHVRGAFTGAHGERRGKFELANGGTL 289
           VA ALH+ S R DKP ++LN AA+P  L+ESELFGH +GAFTGA   R+G+FE ANGGTL
Sbjct: 179 VAGALHKHSPRKDKPFIALNMAAIPKDLIESELFGHEKGAFTGAANVRQGRFEQANGGTL 238

Query: 290 FLDEVGELPLTVQAKLLRVLQSGQLQRLGSDREHRVDVRLIAATNRDLAAEVRTGNFRAD 349
           FLDE+G++PL VQ +LLRVL  GQ  R+G     +VDVR+IAAT++DL   V  G FR D
Sbjct: 239 FLDEIGDMPLDVQTRLLRVLADGQFYRVGGHSAVQVDVRIIAATHQDLEQLVLKGGFRED 298

Query: 350 FYHRLSVYPLHVPPLRERGRDVLLLAGYFLEQNRSRLGLNSLRLSHEAQAALIAYDWPGN 409
            +HRL+V  +H+PPL +R  D+  LA +FL      +G+ +  L+ E  A L    WPGN
Sbjct: 299 LFHRLNVIRIHLPPLSQRREDIPQLASHFLASAAKEIGVEAKILTKETAAKLSQLPWPGN 358

Query: 410 VRELEHLIGRSALKALGQHPDRPRILTLEAIDLDLRVSATTPGTLPSPAAPLQVVTP--P 467
           VR+LE+      + A GQ    P+ L  E +     ++    G+    +A  + +     
Sbjct: 359 VRQLENTCRWLTVMASGQE-ILPQDLPPELLKEPTSINPMAKGSQDWQSALTEWIDQKLS 417

Query: 468 EGG---LREAVDSYQRQVIEACLQRHQDNWAAAARELGLDRANLSRLARRLGL 517
           EG    L E   +++R ++E  L+  Q +   AA+ LG  R  L+R  + L +
Sbjct: 418 EGNSDLLTEVQPAFERILLETALRHTQGHKQEAAKRLGWGRNTLTRKLKELSM 470