Pairwise Alignments

Query, 518 a.a., DNA-binding transcriptional dual regulator (NO) from Pseudomonas putida KT2440

Subject, 515 a.a., nif-specific regulatory protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  252 bits (643), Expect = 3e-71
 Identities = 188/518 (36%), Positives = 275/518 (53%), Gaps = 30/518 (5%)

Query: 7   LTTLLPLVSDLSRDLPDQERYRRLLQAMRGLLPCDAAALLRLDGEW--LVPLAVDGLSPD 64
           L  L  + + + R L  ++     L+ +   L      +  LDGE   LV  A  GLS +
Sbjct: 10  LKALRAISNVIDRALQLEDALTETLRVLAETLAMQRGTITLLDGETGQLVIAASHGLSRE 69

Query: 65  TLGRR-FRVSEHPRFQILLS-RPEPTRFASDSELPDPYDGLVNAPDADLEVHDCMGCPLM 122
              R  +R+ E     I  + RP   R   +  L   +     A   +      +G P++
Sbjct: 70  EQERGVYRLDEGVTGTIFSTGRPYLVRDVRNDPL---FLDRTGARRVERGKVSFLGVPIL 126

Query: 123 VDERPWGLVTLDALTPGQFQSLE-LDALQAFASLAAATVTVAERI--EHLALRAEDEHHR 179
              RP G++ +D L        E ++ L+  A+L A  +++ E++     ALR E+   R
Sbjct: 127 SKGRPVGVLNVDRLFGDAVSCAEDIEFLEVVATLVAQFLSLNEQVAARERALRRENMQLR 186

Query: 180 AELYRQASGQDRELIGQSPAHKRLVEEIRLVGSSDLTVLITGETGVGKELVAQALHRASS 239
               R    +   ++G+S A   +   I+ V  +  TVL+ GE+GVGK L+A+ +H  S 
Sbjct: 187 T---RVLDSRGDFIVGRSGAMAEVQRYIQRVAGTRATVLLLGESGVGKTLIARLVHTLSE 243

Query: 240 RADKPLVSLNCAALPDTLVESELFGHVRGAFTGAHGERRGKFELANGGTLFLDEVGELPL 299
           R   P + +NCA++P++L+E+ELFGH +GAFTGA   R G+FE A+ GT+FLDE+GELP 
Sbjct: 244 REHHPFIKVNCASIPESLLEAELFGHEKGAFTGAVSARMGRFEEAHEGTVFLDEIGELPP 303

Query: 300 TVQAKLLRVLQSGQLQRLGSDREHRVDVRLIAATNRDLAAEVRTGNFRADFYHRLSVYPL 359
            +QAKLLRVLQ  + +RLGS+R  RV+VR++AATNRDLAA+V  G FR D Y+RL V+P+
Sbjct: 304 GIQAKLLRVLQEREFERLGSNRTRRVNVRIVAATNRDLAAQVDAGRFRQDLYYRLCVFPI 363

Query: 360 HVPPLRERGRDVLLLAGYFLEQNRSRLGLNSLRLSHEAQAALIAYDWPGNVRELEHLIGR 419
            VPPLRER  D+  L  +FL +     G  SL L+ +A   L  Y WPGNVRE+E+LI R
Sbjct: 364 RVPPLRERPEDITGLLNHFLAKVARDYG-RSLVLAPDALELLQRYAWPGNVREMENLIER 422

Query: 420 SALKALGQHPDRPRILTLEAIDLDLRVSATTPGTLPSPAAPLQVVTPPEGGLREAVDSYQ 479
            A+   G   DR  + +L       +  A   G + +  A      PP   LRE     +
Sbjct: 423 MAILTDGTLADRRFVESLLE-----QAPAGDDGQMRAGLA-----VPP--SLREV----E 466

Query: 480 RQVIEACLQRHQDNWAAAARELGLDRANLSRLARRLGL 517
           +  + A L+R+      AARELGL    +    R+ GL
Sbjct: 467 QGELLAALRRNGWIQHKAARELGLTPRQMGYRIRQWGL 504