Pairwise Alignments

Query, 518 a.a., DNA-binding transcriptional dual regulator (NO) from Pseudomonas putida KT2440

Subject, 476 a.a., sigma-54 dependent transcriptional regulator/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  246 bits (628), Expect = 1e-69
 Identities = 133/326 (40%), Positives = 196/326 (60%), Gaps = 21/326 (6%)

Query: 193 LIGQSPAHKRLVEEIRLVGSSDLTVLITGETGVGKELVAQALHRASSRADKPLVSLNCAA 252
           ++G+ P+ + + E +  V  +   VL+TGE+G GKELVA+A+H    R  +  V++NC A
Sbjct: 169 IVGRCPSMRAVFETVAKVAVTGAPVLVTGESGTGKELVARAIHALGPRCTRTFVAINCGA 228

Query: 253 LPDTLVESELFGHVRGAFTGAHGERRGKFELANGGTLFLDEVGELPLTVQAKLLRVLQSG 312
           +PD L+E+E FG+ +GAFTGA    +GK E A+GGTLFLDE+GELP  +Q KLLR LQ  
Sbjct: 229 IPDNLLEAEFFGYEKGAFTGATQRVQGKVEYADGGTLFLDEIGELPANLQVKLLRFLQEK 288

Query: 313 QLQRLGSDREHRVDVRLIAATNRDLAAEVRTGNFRADFYHRLSVYPLHVPPLRERGRDVL 372
            +QR+G  ++  VD R++AATNRD+  E+ +G FR D Y+R+ V P+ +PPLR RG D+L
Sbjct: 289 VIQRVGGRKDIAVDARIVAATNRDIQTEIASGRFREDLYYRIGVVPVALPPLRARGDDIL 348

Query: 373 LLAGYFLEQNRSRLGLNSLRLSHEAQAALIAYDWPGNVRELEHLIGRSALKALGQHPDRP 432
           LLA +FLE +      N +  S  A+ A++ Y WPGNVRELE+ + R+ + A G+     
Sbjct: 349 LLARHFLESSAGEGTGNIVGFSPAAEQAMLRYAWPGNVRELENKVRRAVIFASGR----- 403

Query: 433 RILTLEAIDLDLRVSATTPGTLPSPAAPLQVVTP-PEGGLREAVDSYQRQVIEACLQRHQ 491
           RI+               P  L     P +   P PEG LREA ++ +R ++ + L +  
Sbjct: 404 RIM---------------PDDLGFDETPAKAAAPRPEGSLREARNALERDMVLSALDKCG 448

Query: 492 DNWAAAARELGLDRANLSRLARRLGL 517
            N   A+  +G+ R     L R+ G+
Sbjct: 449 GNIVQASLAIGVSRPTFYDLLRKHGI 474