Pairwise Alignments

Query, 518 a.a., DNA-binding transcriptional dual regulator (NO) from Pseudomonas putida KT2440

Subject, 472 a.a., sigma-54 dependent transcriptional regulator/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  253 bits (646), Expect = 1e-71
 Identities = 149/373 (39%), Positives = 220/373 (58%), Gaps = 6/373 (1%)

Query: 147 DALQAFASLAAATVTVAERIEHLALRAEDEHHRAELYRQASGQDRELIGQSPAHKRLVEE 206
           D ++   SL    +     +E   LR E++  R+ L   A  +  ELIG+S   +R+ E+
Sbjct: 99  DFIEKPLSLEKVVIAAERALEMRELRRENQALRSSL--GAGSKADELIGESAPMRRIREQ 156

Query: 207 IRLVGSSDLTVLITGETGVGKELVAQALHRASSRADKPLVSLNCAALPDTLVESELFGHV 266
           I  V  +D  VLITGE G GKEL A+A+H  S RA +PLV++NCAA+P+ L+ESELFGH 
Sbjct: 157 IARVAPTDAWVLITGENGTGKELAARAVHAGSQRATRPLVAVNCAAIPEELIESELFGHE 216

Query: 267 RGAFTGAHGERRGKFELANGGTLFLDEVGELPLTVQAKLLRVLQSGQLQRLGSDREHRVD 326
           +GAFTGA   R GKFE+A+ GTLFLDE+G++ L  QAK+LR+LQ    +++G  R  RVD
Sbjct: 217 KGAFTGAESARTGKFEMAHRGTLFLDEIGDMSLKTQAKILRILQEQSFEKVGGTRTIRVD 276

Query: 327 VRLIAATNRDLAAEVRTGNFRADFYHRLSVYPLHVPPLRERGRDVLLLAGYFLEQNRSRL 386
           VR++AATN++L  ++  G FR D Y+RL V+PL +P LRERG D+L L   F+ +     
Sbjct: 277 VRVVAATNKNLEEQIAQGTFREDLYYRLRVFPLSLPALRERGDDILRLLDAFMLRLCRDH 336

Query: 387 GLNSLRLSHEAQAALIAYDWPGNVRELEHLIGRSALKALGQHPDRPRILTLEAIDLDLRV 446
               L  + +AQ  L+ Y WPGNVREL + + R  +   G+  D    L  E +  DL  
Sbjct: 337 AFAPLTFTDDAQDVLLRYRWPGNVRELRNFVERMLILHAGESVD-VEDLPPECL-RDLSP 394

Query: 447 SATTPGTLPSPAAPLQVVTPPEGGL--REAVDSYQRQVIEACLQRHQDNWAAAARELGLD 504
           S+ +     + +A     T  +G L  + A ++++ + +   LQ    N +  A  +GL+
Sbjct: 395 SSDSATGTAAQSATATCGTGVDGILDFKAARNAFETRFLAEQLQECGGNVSRLAERIGLE 454

Query: 505 RANLSRLARRLGL 517
           R++L R  +  G+
Sbjct: 455 RSHLHRKLKGYGI 467