Pairwise Alignments

Query, 518 a.a., DNA-binding transcriptional dual regulator (NO) from Pseudomonas putida KT2440

Subject, 551 a.a., sigma-54 dependent transcriptional regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  277 bits (708), Expect = 8e-79
 Identities = 175/411 (42%), Positives = 232/411 (56%), Gaps = 24/411 (5%)

Query: 120 PLMVDERPWGLVTLDALTP-----GQFQSLELDALQAFASLAAATVTVAERIEH-LALRA 173
           P+M      GL+ L    P     G   SL     + +A   AA +T A   E  L LR 
Sbjct: 142 PMMCKGELVGLLALFYERPMTDRLGDLLSLHYKMHKIYADSLAAAITNARAFEEILHLRR 201

Query: 174 EDEHHRAELYRQASGQDRE----LIGQSPAHKRLVEEIRLVGSSDLTVLITGETGVGKEL 229
           E E     L RQ      +    ++G  PA  R++ ++ +V  +D TVL+ GE+G GKEL
Sbjct: 202 ELERENERLRRQVEHGSADGNLPIVGDCPAWLRVLAQVDMVAPTDATVLVQGESGTGKEL 261

Query: 230 VAQALHRASSRADKPLVSLNCAALPDTLVESELFGHVRGAFTGAHGERRGKFELANGGTL 289
           VA+A+HR S R+  PLV +NC+A+P  L ESE FGHV+GAFTGA  +R G+F++A+GGTL
Sbjct: 262 VAEAIHRRSQRSTAPLVRVNCSAIPRELFESEFFGHVKGAFTGAVRDRIGRFQMADGGTL 321

Query: 290 FLDEVGELPLTVQAKLLRVLQSGQLQRLGSDREHRVDVRLIAATNRDLAAEVRTGNFRAD 349
           FLDEVGE+PL +Q KLLRVLQ G  +R+G DR   VDVR+IAATNRDL  EV  G FR D
Sbjct: 322 FLDEVGEIPLELQGKLLRVLQEGTFERVGEDRTRSVDVRIIAATNRDLRQEVDAGRFRQD 381

Query: 350 FYHRLSVYPLHVPPLRERGRDVLLLAGYFLEQNRSRLGLNSLRLSHEAQAALIAYDWPGN 409
            + RLSV+P+ +PPLR+R  D+ LLA +F+ Q+  RLGL + RL+  A A L AY WPGN
Sbjct: 382 LFFRLSVFPVELPPLRDRQGDIPLLARHFIAQSSRRLGLPTPRLTPAALARLSAYPWPGN 441

Query: 410 VRELEHLIGRSALKALGQHPDRPRILTLEAIDLDLRVSATTPGTLPSPAAPLQVVTPPEG 469
           VRE++++I R+ + A         +   E +  D RVS       P+P A   V      
Sbjct: 442 VREMQNVIERAVIMAEEGALGMDALPAPEGLRHDDRVSVAA----PAPGATTIVT----- 492

Query: 470 GLREAVDSYQRQVIEACLQRHQ---DNWAAAARELGLDRANLSRLARRLGL 517
              E   + QR  I   LQ  +        AA  LG+    L    + LGL
Sbjct: 493 --EEEWRTMQRDNIRRALQAAEGRVHGVGGAAELLGIPPTTLRSRMQALGL 541