Pairwise Alignments

Query, 518 a.a., DNA-binding transcriptional dual regulator (NO) from Pseudomonas putida KT2440

Subject, 476 a.a., sigma-54 dependent transcriptional regulator/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  256 bits (653), Expect = 2e-72
 Identities = 143/348 (41%), Positives = 210/348 (60%), Gaps = 9/348 (2%)

Query: 172 RAEDEHHRAELYRQASGQDRELIGQSPAHKRLVEEIRLVGSSDLTVLITGETGVGKELVA 231
           R  DE+ R        G+  EL+G+SPA + +   +  V  SD TVLI GE+G GKE+VA
Sbjct: 126 RLLDENRRLRDLVALVGESGELVGESPAMQSVRRTVATVAPSDYTVLIRGESGTGKEMVA 185

Query: 232 QALHRASSRADKPLVSLNCAALPDTLVESELFGHVRGAFTGAHGERRGKFELANGGTLFL 291
           + +HR S R D+P ++LNC A+P+ L+ESELFGHVRGAFTGA  +R+G F +A+GGT+ L
Sbjct: 186 RMVHRLSPRVDEPFLALNCPAIPEHLLESELFGHVRGAFTGAERDRKGLFSIADGGTVLL 245

Query: 292 DEVGELPLTVQAKLLRVLQSGQLQRLGSDREHRVDVRLIAATNRDLAAEVRTGNFRADFY 351
           DE+G++   +Q KLLR LQ G+++ +GS R   VDVR+IA+TN+DL A + + +FR D +
Sbjct: 246 DEIGDISSNIQTKLLRFLQEGEVRPVGSPRNEHVDVRIIASTNQDLEARMASRDFREDLF 305

Query: 352 HRLSVYPLHVPPLRERGRDVLLLAGYFLEQNRSRLGLNSLRLSHEAQAALIAYDWPGNVR 411
           +RL+V  + VPPLRER  D+ LLA  FL +    LG+            L+  +WPGNVR
Sbjct: 306 YRLNVVTIWVPPLRERLSDIPLLAATFLARASRELGVPQRDFDEGVLDHLMRREWPGNVR 365

Query: 412 ELEHLIGRSALKALGQHPDRPRILTLEAIDLDLRVSATTPGTL--PSPAAPLQVVTPPEG 469
           EL++ + R AL + G        +TL+A+    +  +  P  L  PSP A  +V+ P + 
Sbjct: 366 ELQNYVRRLALFSRGDG------ITLDAVQQAEQSESGAPAALCVPSPVAEGEVM-PYKD 418

Query: 470 GLREAVDSYQRQVIEACLQRHQDNWAAAARELGLDRANLSRLARRLGL 517
                V+S+  + +   L+    N   AAR  GL R ++ ++  R G+
Sbjct: 419 AKASLVESFSERYLRDLLESTGGNVTEAARLSGLSRVSIQKMVARYGI 466