Pairwise Alignments

Query, 518 a.a., DNA-binding transcriptional dual regulator (NO) from Pseudomonas putida KT2440

Subject, 493 a.a., two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  230 bits (586), Expect = 1e-64
 Identities = 114/230 (49%), Positives = 158/230 (68%)

Query: 188 GQDRELIGQSPAHKRLVEEIRLVGSSDLTVLITGETGVGKELVAQALHRASSRADKPLVS 247
           G  +  IG S A + + + I  V +S  +V I GE+G GKE+ AQA+H+  +RADKP ++
Sbjct: 137 GHYQGFIGDSLAMQSVYKTIDCVANSKASVFIMGESGTGKEVCAQAIHQVGNRADKPFIA 196

Query: 248 LNCAALPDTLVESELFGHVRGAFTGAHGERRGKFELANGGTLFLDEVGELPLTVQAKLLR 307
           LNCA++P  L+ESE+FGH +GAFTGAH  R G    A+GGTLFLDE+ E+ L +Q+KLLR
Sbjct: 197 LNCASIPKELIESEIFGHCKGAFTGAHNNRDGAATRADGGTLFLDEICEMDLELQSKLLR 256

Query: 308 VLQSGQLQRLGSDREHRVDVRLIAATNRDLAAEVRTGNFRADFYHRLSVYPLHVPPLRER 367
            +Q+G  QR+G  +E  VD+R I+ATNR+   EV+ G+FR D ++RL V P+ +PPLR R
Sbjct: 257 FIQTGTFQRVGGSKEEHVDIRFISATNREPWEEVKLGHFREDLFYRLHVIPIELPPLRAR 316

Query: 368 GRDVLLLAGYFLEQNRSRLGLNSLRLSHEAQAALIAYDWPGNVRELEHLI 417
           G DVLLLA   L+      G   +  + +A A L AYDWPGNVR+L+++I
Sbjct: 317 GNDVLLLAKQLLKTYSKEEGKKFIDFNPQAAAMLQAYDWPGNVRQLQNVI 366