Pairwise Alignments

Query, 478 a.a., Outer membrane efflux protein from Pseudomonas putida KT2440

Subject, 479 a.a., channel protein TolC from Pseudomonas fluorescens FW300-N2E3

 Score = 67.0 bits (162), Expect = 1e-15
 Identities = 97/423 (22%), Positives = 169/423 (39%), Gaps = 47/423 (11%)

Query: 58  GMAPVASGERLSLTDAVL---QAAQWHPSIAEAIGNLYKQGEGINVARAGYYPQISGG-- 112
           GMA  A     S TD V    +A   +  +A A      Q E +  ARAG  P +SG   
Sbjct: 17  GMAWAAEAPLSSNTDLVSVYQEAVDNNADLAAARAQYGAQKEVVPQARAGLLPNLSGSAE 76

Query: 113 ---IRTGYDTGYG-GDRNSQALNLSLKQMLYDFGKVDSAVNAAQAAAARAQANILLVVDD 168
              +RT  D      +R++     +L Q L+   +    + AA+    +A   +     +
Sbjct: 77  VADVRTKIDQPSAIANRSAHFYQATLAQPLFRADRWFQ-LQAAKDVNEQAALQLSATEQN 135

Query: 169 LARDTAYAWIETRRYEQLMTIARDQIRGVGDIAGMARQRSDMGASTRSDVVQAESRVESA 228
           L   +A  +    R +  +   + +          + +R D+G S ++DV+Q+++  ++A
Sbjct: 136 LILKSAETYFNVLRSQDNLASTKAEEAAFKRQLDQSNERFDVGLSDKTDVLQSQASYDTA 195

Query: 229 RATLEEYQSQYERWRSTLAALMGR-------------VTPPALAEGSPAELDQACKRPAQ 275
           RA     Q Q +     L  L  R             V PPA    + A +D A K+   
Sbjct: 196 RANRILAQRQVDDAFEALITLTNRQYNSIQGIVHTLPVLPPA-PNDAKAWVDTAAKQNLN 254

Query: 276 GDDRLPAVLMALAQRAQGQAELAQAKAEAYPTLSLQPQVNHYLDDDYNRDNARL------ 329
                  +L +    +  +  L Q KA   PTL    Q     +D     N         
Sbjct: 255 -------LLASNYAVSAAEETLKQRKAGHAPTLDAVAQYKTGDNDALGFSNPSAFGQPYG 307

Query: 330 -DRTQAGIYLNVEVPIYQGGSISARTRAAGHALTAADSAEDAARLQA---RRGLAEA-KA 384
              +Q+ + L + +PIY GG  S++ R +   L   +   +A R Q     R L  A  +
Sbjct: 308 GTVSQSTVGLQLNIPIYSGGLTSSQVRESYSRLDQNEQQREALRRQVVENTRNLHRAVNS 367

Query: 385 QTSGLGRRLTSLEARQVSIQEARMLYGRQYLDLGTRPLLDLLNAEQEIYQSRFELAGTRS 444
               +  R  S+ + Q +++   + Y      +GTR ++D+L+A++++Y S      +R 
Sbjct: 368 DVEQVQARRQSIISNQSAVEATEIGY-----QVGTRNIVDVLDAQRQLYTSVRNYNNSRY 422

Query: 445 DLL 447
           D +
Sbjct: 423 DYI 425