Pairwise Alignments

Query, 722 a.a., Protein secretion ABC efflux system, permease and ATP-binding protein from Pseudomonas putida KT2440

Subject, 721 a.a., Type I secretion system ATPase, LssB family LapB from Pseudomonas fluorescens FW300-N2E2

 Score =  394 bits (1012), Expect = e-114
 Identities = 232/660 (35%), Positives = 361/660 (54%), Gaps = 1/660 (0%)

Query: 62  EILRHMARQAGLALRFVHFDAKGLRQWRTPLVLELDDGQLAVVESVTEEDDLAVVFAGDQ 121
           E+L   A +AGL  R +    + +     P +L L DG+ AV+     +D   ++ +   
Sbjct: 59  ELLSRAAARAGLQGRVLQRKLEQIPTIAMPALLLLKDGRSAVLLGWVGDDQARLLLSESD 118

Query: 122 GLTSRLPRDTLKGRISRVALLRPARPLRDVRTDDYTAPYDRHWFARIVLRDLRPYGQVMI 181
           G    + R+ L    S        +   DV       P  R WF   + R    Y   + 
Sbjct: 119 GGEVTISRELLADDYSGKVFFAQPQHKFDVNHGTLI-PRARSWFRDTLKRSRWLYADAIA 177

Query: 182 ASLVANVLALAGVLFSMQVYDRVIPAESLPTLYVLFGGVVLALVFDFSMRLLRLKVTDLL 241
           ASL+ N++A+A  LF M VYDRV+P ++  TL+VL  G++ A VFD  +++LR    DL 
Sbjct: 178 ASLLINIIAMAAPLFVMNVYDRVVPNQAESTLWVLAVGIIGAYVFDLILKMLRSLCLDLA 237

Query: 242 GKRADLRVSDLVYGHALRLRNSVRPKSTGSFISQLRELESIRDLITSSTATVLADLPFFL 301
           GK+ DL +S  ++   + +    RP   GSF   + E +S+RD + S T T L DLPF L
Sbjct: 238 GKKTDLIISATLFERIVGMSMKYRPARVGSFAQNIHEFQSLRDFLASLTLTSLIDLPFTL 297

Query: 302 LFLFVFWLIGGVLVFIPLVALLAMVLPGLLAQRRLARLANASMRESALRNAMLVESIQGL 361
           L   V  +IGG LV+IP++A    +L G   Q+ L      +M   A R + L+E++ GL
Sbjct: 298 LIFMVIAIIGGHLVWIPVLAFPIALLIGYALQKPLVATMERTMALGAERQSSLIETLAGL 357

Query: 362 DEIKALQAEARFERQWNQYNAACAHTNLRLRTLTNGLVTWTQNVQGAVFAVVIVIGAPMV 421
           D +K   AE+  + QW Q     +   LR++ L+   +  T  +Q     ++IV G  ++
Sbjct: 358 DAVKVNNAESERQYQWEQTIGTLSRLELRVKMLSGLAMNITLLIQQLAGVIMIVFGVYLI 417

Query: 422 IAGDLTTGSLVAASMLSSRMMAPLAQLTHVLTRWQQAKVALQGLDKLMQSPVDHPEGEAR 481
           IAG+L+ G LVA  MLS R ++PLA L+ +LTR+QQA+V +  +D++M+ P +    E  
Sbjct: 418 IAGNLSMGGLVACYMLSGRALSPLASLSGLLTRYQQARVTMTSVDQMMELPQERNFDERP 477

Query: 482 VHLPAIHGEYRLRQANFRYSEDYPPVLNIGRLDIQPGERIAVLGRNGAGKSTLLQALGGA 541
           +    + G    RQ NF Y     P L    L I+PGE+I ++GR+G+GKS+L + L G 
Sbjct: 478 LSRKVLQGAVECRQLNFTYPNQQNPALKNINLVIKPGEKIGIIGRSGSGKSSLAKLLVGL 537

Query: 542 MDLVQGEISLDGIAMAHLDPADLRRDVGLLPQYARLFHGTLRENLTLGAGQASDQELVAA 601
                G + +DG+ +  +D ++LR ++G +PQ  +L  GTLR+NLT GA    D+ ++ A
Sbjct: 538 YQPDDGALLVDGVDIRQIDVSELRYNIGYVPQDIQLLAGTLRDNLTSGARYVEDELVLQA 597

Query: 602 LAATGALDFVRRLPKGMDHLILEGGLGLSGGQRQALVLSRLLVRQPQVLLLDEPTASLDD 661
               G  +F R  P+G +  + E G  LSGGQRQ + L+R L+  P +LLLDEPT+++D+
Sbjct: 598 AELAGVHEFARLHPQGYELQVGERGQNLSGGQRQNVALARALLLNPPILLLDEPTSAMDN 657

Query: 662 MTERKLLDNLERFCQGRTLVIATHRLSVLQRVDRILVLDAGRIVIDDARDAALAKLQGAQ 721
             E +L   L    + +T+++ THR S+L  VDR+LV+D G+I+ D  + A +  L+  Q
Sbjct: 658 TGEERLKQRLAAVVENKTVLLVTHRASLLSLVDRLLVIDRGQILADGPKAAVMEALKKGQ 717