Pairwise Alignments

Query, 722 a.a., Protein secretion ABC efflux system, permease and ATP-binding protein from Pseudomonas putida KT2440

Subject, 583 a.a., type I secretion protein from Azospirillum brasilense Sp245

 Score =  197 bits (500), Expect = 2e-54
 Identities = 139/526 (26%), Positives = 258/526 (49%), Gaps = 16/526 (3%)

Query: 185 VANVLALAGVLFSMQVYDRVIPAESLPTLYVLFGGVVLALVFDFSMRLLRLKVTDLLGKR 244
           + N+LAL G  + MQ+YDR + + S+PTL  +    +    F     ++R ++   +G R
Sbjct: 35  IINLLALTGAFYMMQIYDRALTSGSVPTLVAMSVLAIGLYAFQGLFDVIRSQILVRVGAR 94

Query: 245 ADLRVSDLVYGHALRLRNSVRPK---STGSFISQLRELESIRDLITSSTATVLADLPFFL 301
            D +++ + +  A+ +     P+   ST   + + R+++++R  +       L DLP+  
Sbjct: 95  LDRKIAPMAHQVAVDM-----PRYGFSTAEALERGRDVDTLRGFLGGQGPVALFDLPWMP 149

Query: 302 LFLFVFWLIGGVLVFIPLVALLAMVLPGLLAQRRLARLANASMRESALRNAMLVESIQGL 361
           LFL   +L+  +L  +       + L  ++ +    RL+ A+ +    RNA+   + +  
Sbjct: 150 LFLVFVYLLHPLLGALTFGGAFVLTLLTIVTELMTRRLSGATHQAVITRNAIADSNARNA 209

Query: 362 DEIKALQAEARFERQWNQYNAACAHTNLRLRTLTNG--LVTWTQNVQGAVFAVVIVIGAP 419
           D +KA+    R   ++N+ N A  H  L+ RT   G      ++ ++  + + V+ +GA 
Sbjct: 210 DILKAMGFAGRAVARFNRANDA--HLALQTRTSDIGGTFGAVSRVLRMILQSAVLGLGAF 267

Query: 420 MVIAGDLTTGSLVAASMLSSRMMAPLAQLTHVLTRWQQAKVALQGLDKLMQSPVDHPEGE 479
           + I GDL+ G+++AAS+ S+R +AP+      +  W+    A     +L ++ V   E  
Sbjct: 268 LAIQGDLSAGAIMAASVASARALAPIDL---AIGNWKGVVAARAAYHRLKETAVALAEAA 324

Query: 480 ARVHLPAIHGEYRLRQANFRYSEDYPPVLNIGRLDIQPGERIAVLGRNGAGKSTLLQALG 539
             + LP      ++             +L+    +++ G+ + ++G +G GK+TL++AL 
Sbjct: 325 EPMELPPPRATLKVENITVAAPGSGRVLLSDVSFEVRAGQAVGIIGPSGGGKTTLVRALT 384

Query: 540 GAMDLVQGEISLDGIAMAHLDPADLRRDVGLLPQYARLFHGTLRENLTLGAGQASDQELV 599
           G   +++G + LD   +A  D   L R +G LPQ   L   T+ +N+     +   + +V
Sbjct: 385 GIWPVLRGSVRLDDADLAQWDEGALGRSIGYLPQEVALMDTTIEDNIARLEEEPDPRNIV 444

Query: 600 AALAATGALDFVRRLPKGMDHLILEGGLGLSGGQRQALVLSRLLVRQPQVLLLDEPTASL 659
           AA  A G  + + RLP G    +   G  L+GGQRQ + L+R L   P V++LDEP ++L
Sbjct: 445 AAAQAAGVHEMILRLPDGYHTELGPQGTALAGGQRQRVGLARALYGNPFVVVLDEPNSNL 504

Query: 660 DDMTERKLLDNLERF-CQGRTLVIATHRLSVLQRVDRILVLDAGRI 704
           D   E  L   +     +G  +++  HR S L  VD + V+  GR+
Sbjct: 505 DGEGEAALTAAIRDVRSRGGIVIVIAHRPSALAAVDLVAVVQNGRM 550