Pairwise Alignments

Query, 722 a.a., Protein secretion ABC efflux system, permease and ATP-binding protein from Pseudomonas putida KT2440

Subject, 721 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

 Score =  270 bits (690), Expect = 2e-76
 Identities = 170/562 (30%), Positives = 290/562 (51%), Gaps = 7/562 (1%)

Query: 164 WFARIVLRDLRPYGQVMIASLVANVLALAGVLFSMQVYDRVIPAESLPTLYVLFGGVVLA 223
           WFA  +LR       V + ++   + AL   +    V D+V+   SL +L+VL   ++  
Sbjct: 155 WFAPSILRQKSQLRDVFLYAIALQIFALVSPMLFENVIDKVLVGRSLSSLHVLALAMLAL 214

Query: 224 LVFDFSMRLLRLKVTDLLGKRADLRVSDLVYGHALRLRNSV-RPKSTGSFISQLRELESI 282
            + + +   LR  V   L  + +  +S  +Y H + L  +  + + TG  I+++RE+  I
Sbjct: 215 AIAEPAYSYLRNTVFGHLASQVNAELSGRLYRHLVGLPLTYFKQRQTGQIIARVREMAQI 274

Query: 283 RDLITSSTATVLADLPFFLLFLFVFWLIGGVLVFIPLVALLAMVLPGLLAQRRLARLANA 342
           R  +T ST  +L DL F  +FL V +     L ++ + +L+   +  L+A   + +   +
Sbjct: 275 RQFLTGSTLMLLLDLIFVTVFLAVMFHYASTLTWLVIGSLVIYFVLWLIAGPLIRKKVES 334

Query: 343 SMRESALRNAMLVESIQGLDEIKALQAEARFERQWNQYNAACAHTNLRLRTLTNGLVTWT 402
                A     L E++ G++ IK    E RF  QW +  +     N       +GL+   
Sbjct: 335 EYESDANATTFLTEAVTGIETIKTTATEHRFLEQWQRILSQ--QLNRSFDAQKSGLIAGQ 392

Query: 403 QN--VQGAVFAVVIVIGAPMVIAGDLTTGSLVAASMLSSRMMAPLAQLTHVLTRWQQAKV 460
               VQ    A+++  G   V+ G++T G LVA +ML+  +  P+ +L  +   +Q   +
Sbjct: 393 AIALVQKLTAALLLWWGVSAVLKGEITPGQLVAFNMLAGHVTQPVLRLAQIWQDFQHTLI 452

Query: 461 ALQGLDKLMQSPVDHPEGEARVHLPAIHGEYRLRQANFRYSEDYPPVLNIGRLDIQPGER 520
           AL+ +  ++  P ++ + +    +P + G        FRY +D P VL    L I+PG+ 
Sbjct: 453 ALRRVGDILDEPRENSK-QGLASVPELDGGIEFSNIRFRYHQDAPEVLANLSLKIKPGQF 511

Query: 521 IAVLGRNGAGKSTLLQALGGAMDLVQGEISLDGIAMAHLDPADLRRDVGLLPQYARLFHG 580
           I V G +G+GKSTL + L        G++ +DG+ +A  DP  LRR++ ++ Q + LF G
Sbjct: 512 IGVTGPSGSGKSTLTRLLQRLYVPQHGQVLVDGMDLAIADPVSLRRNMSVVLQESILFSG 571

Query: 581 TLRENLTLGAGQASDQELVAALAATGALDFVRRLPKGMDHLILEGGLGLSGGQRQALVLS 640
           ++ +N+ L   QASD+E+  A    GAL F+  LP G +  + E G  LSGGQRQ + L+
Sbjct: 572 SVADNIRLCKPQASDEEIRHAAQLAGALAFIEGLPHGFNQPVGEKGAALSGGQRQRIALA 631

Query: 641 RLLVRQPQVLLLDEPTASLDDMTERKLLDNLERFCQGRTLVIATHRLSVLQRVDRILVLD 700
           R L+  P++LLLDE T++LD  +E  ++ N++  C+GRT++   HRL+ ++  D I VLD
Sbjct: 632 RALLVNPRILLLDEATSALDYNSEASIMSNMDEICRGRTVISIAHRLNTIRHADNIFVLD 691

Query: 701 AGRIVIDDARDAALAKLQGAQA 722
            G++      +  LA+ QG  A
Sbjct: 692 KGQVAESGTHEELLAQ-QGLYA 712