Pairwise Alignments

Query, 722 a.a., Protein secretion ABC efflux system, permease and ATP-binding protein from Pseudomonas putida KT2440

Subject, 598 a.a., Type I secretion system ATPase, PrtD from Pseudomonas syringae pv. syringae B728a

 Score =  218 bits (556), Expect = 5e-61
 Identities = 167/541 (30%), Positives = 269/541 (49%), Gaps = 22/541 (4%)

Query: 187 NVLALAGVLFSMQVYDRVIPAESLPTLYVLFGGVVLALVFDFSMRLLRLKVTDLLGKRAD 246
           NVL LA  ++ +QVYDRV+ +++  TL +L   VV    F   + ++R  V   +G   +
Sbjct: 34  NVLMLAPSIYMLQVYDRVLTSQNQTTLAMLTLMVVGFFAFIGLLEMVRSFVVIRIGSELE 93

Query: 247 LRVSDLVYGHALRLRNSVRPKSTGSFISQLRELESIRDLITSSTATVLADLPFFLLFLFV 306
            R +  VY  A         +  G     L +L  IR  +T        D P+F ++L V
Sbjct: 94  KRFNLRVYQAAFESNLHAGQRQAGQ---ALGDLTFIRQFLTGPALFAFFDAPWFPIYLAV 150

Query: 307 FWLIG---GVLVFIPLVALLAMV-LPGLLAQRRLARLANASMRESAL--RNAMLVESIQG 360
            +L     GVL  +  V L+ +  L   L ++ LA  +  S + + L  R+    E+IQ 
Sbjct: 151 IFLFDPWLGVLASVGTVLLVGLACLNEWLTRKPLAEASGYSQQSAQLATRHLQQAEAIQA 210

Query: 361 LDEIKALQAEARFERQWNQYNAACAHTNLRLRTLTNGLVTWTQNVQGAVFAVVIVIGAPM 420
           +  ++ L+      R+W   +        R       + + ++ ++  + ++V+ +GA +
Sbjct: 211 MGMLEVLR------RRWFHVHGRFLALQNRASDTGAVISSISKALRLCLQSLVLGLGALL 264

Query: 421 VIAGDLTTGSLVAASMLSSRMMAPLAQLTHVLTRWQQAKVALQGLDKLMQSPVDHPEGEA 480
           VI GD+T G ++A S+L  R+++P+ QL  V  +W  A++A   LD+L+++   + E   
Sbjct: 265 VINGDMTAGMMIAGSILMGRVLSPIDQLIAVWKQWSSARLAYGRLDQLLKT---YAEPAP 321

Query: 481 RVHLPAIHGEYRLRQANFRYSEDYPPVLNIGRLDIQPGERIAVLGRNGAGKSTLLQALGG 540
           R+ LPA  G+    Q +        P +      +Q GE + VLG +G+GKSTL + L G
Sbjct: 322 RMPLPAPRGQISAEQVSAAPPGKTSPTIQQVSFQLQAGEVLGVLGASGSGKSTLARVLVG 381

Query: 541 AMDLVQGEISLDGIAMAHLDPADLRRDVGLLPQYARLFHGTLRENLT-LGAGQASDQELV 599
               + G + LDG  M   D   L   +G LPQ   LF G++ EN+     G AS   +V
Sbjct: 382 VWPALGGTVRLDGADMHRWDREALGPYIGYLPQDIELFGGSVAENIARFREGDAS--AVV 439

Query: 600 AALAATGALDFVRRLPKGMDHLILEGGLGLSGGQRQALVLSRLLVRQPQVLLLDEPTASL 659
           AA    G  + + RLP+G D  + + G GLSGGQ+Q + L+R L   P++++LDEP ++L
Sbjct: 440 AAAQLAGVHELILRLPQGYDTRLGDDGAGLSGGQKQRVALARALYGDPRLVVLDEPNSNL 499

Query: 660 DDMTERKLLDNL-ERFCQGRTLVIATHRLSVLQRVDRILVLDAGRIVIDDARDAALAKLQ 718
           D   E  L   + E   +G T+V+ THR   L + DR+LVL  GR+    A    L  L 
Sbjct: 500 DAAGEAALTQAIAELKTRGCTVVLVTHRTQSLNQTDRLLVLSEGRMQAFGATAQVLQALS 559

Query: 719 G 719
           G
Sbjct: 560 G 560