Pairwise Alignments

Query, 722 a.a., Protein secretion ABC efflux system, permease and ATP-binding protein from Pseudomonas putida KT2440

Subject, 584 a.a., Type I secretion system ATPase, PrtD from Pseudomonas syringae pv. syringae B728a

 Score =  201 bits (511), Expect = 9e-56
 Identities = 149/550 (27%), Positives = 270/550 (49%), Gaps = 25/550 (4%)

Query: 183 SLVANVLALAGVLFSMQVYDRVIPAESLPTLYVLFGGVVLALVFDFSMRLLRLKVTDLLG 242
           SL  N L L   L+ +QV  RV+P+ S PTL +L   + + ++   S+  +R ++   + 
Sbjct: 27  SLFVNALMLVPTLYMIQVSGRVVPSSSTPTLIMLTLIMTVLMITMGSLEWVRSRIMVRIS 86

Query: 243 KRADLRVSDLVYGHALRLRNSVRPKSTGSFISQLRELESIRDLITSSTATVLAD---LPF 299
            + D+ +S  VY  + R   ++R     +    L +L S+R  +T +      D   LP 
Sbjct: 87  NKLDVLLSRDVYQASFR--KALRSGGMDASAQSLNDLTSLRQFLTGNGLFAFFDAPWLPI 144

Query: 300 FLLFLFVF-----WL-IGGVLVFIPLVALLAMVLPGLLAQRRLARLANASMRESALRNAM 353
           +   +F+F     W+ +G  +V + L  L        L +     L    +    LRNA 
Sbjct: 145 YTAVMFIFHPWFGWMTVGSAIVLVVLAYLNHRFTGKALTEANQQSLTANLLTTKNLRNAE 204

Query: 354 LVESIQGLDEIKALQAEARFERQWNQYNAACAHTNLRLRTLTNGLVTWTQNVQGAVFAVV 413
           ++ES+  LD + A   +   +R+     +  +  +  + +++     W Q++       +
Sbjct: 205 VIESMGMLDTLMARWGKR--QRRVLVLQSDASDKSGTISSISRTFRNWAQSI-------M 255

Query: 414 IVIGAPMVIAGDLTTGSLVAASMLSSRMMAPLAQLTHVLTRWQQAKVALQGLDKLMQSPV 473
           + +GA +VI   +  G ++A S+L  R ++P+ Q+ +    +  A+V    L + ++   
Sbjct: 256 LALGAYLVITHQINPGLMMAGSLLLGRALSPVDQIINTWKGFVAARVQYTRLSETLEKLH 315

Query: 474 DHPEGEARVHLPAIHGEYRLRQANFRYSEDYPPVLNIGRLDIQPGERIAVLGRNGAGKST 533
           + P+   R+ LP   G  ++            PV+         G  + ++G + AGKST
Sbjct: 316 NEPD---RMALPDPEGHIQVENLVVTPPGGKNPVIRNISFVTPAGTIVGIVGPSAAGKST 372

Query: 534 LLQALGGAMDLVQGEISLDGIAMAHLDPADLRRDVGLLPQYARLFHGTLRENLTLGAGQA 593
           L++AL G      G + LDG  ++  D   L   +G LPQ   LF G++ +N+   A + 
Sbjct: 373 LVRALLGIWPAQHGTVRLDGADISAWDKQKLGPHLGYLPQDIELFEGSISDNIARFA-KV 431

Query: 594 SDQELVAALAATGALDFVRRLPKGMDHLILEGGLGLSGGQRQALVLSRLLVRQPQVLLLD 653
             +++V A    G  + + +LP G D +I   G+ LSGGQRQ + L+R +   P++++LD
Sbjct: 432 DPEKVVLAARTAGVHEMILQLPDGYDTVIGSDGVNLSGGQRQRIGLARAIYGSPRLIVLD 491

Query: 654 EPTASLDDMTERKLLDNLERFCQ-GRTLVIATHRLSVLQRVDRILVLDAGRIVIDDARDA 712
           EP ++LD++ ER L   L+   + G T+ I +HR ++L R+DR++V+ AG I +  ARD 
Sbjct: 492 EPNSNLDEVGERALSVALQLIKESGATVFIVSHRPNILSRLDRVMVMSAGTITLYGARDQ 551

Query: 713 ALAKLQGAQA 722
            +A+L   QA
Sbjct: 552 VIAELAQQQA 561