Pairwise Alignments

Query, 722 a.a., Protein secretion ABC efflux system, permease and ATP-binding protein from Pseudomonas putida KT2440

Subject, 598 a.a., ATPase from Synechococcus elongatus PCC 7942

 Score =  209 bits (533), Expect = 2e-58
 Identities = 167/579 (28%), Positives = 280/579 (48%), Gaps = 28/579 (4%)

Query: 162 RHWFARIVLRDLRPY----GQVMIASLVANV-LALAGVLFSMQVYDRVIPAESLPTLYVL 216
           R W    +L  L PY     +++I SL+  V LALAG +  M V   +   ++ PT  +L
Sbjct: 6   RRWDDWSLLSRLLPYLGRHKRLLIGSLILLVPLALAGAVQPMLVGQAISVLQNKPTWEML 65

Query: 217 FG------------GVVLALVFDFSMRLLRLKVTDLLGKR--ADLRVSDLVYGHALRLRN 262
            G             ++  +V   + R ++      +G+R  AD+R     +  AL +R 
Sbjct: 66  QGMSRSQGLNLLSLALLATIVVRLAFRGVQGYYVQEVGQRVTADIRQDLFQHVTALAVRF 125

Query: 263 SVRPKSTGSFISQL-RELESIRDLITSSTATVLADLPFFLLFLFVFWLIGGVLVFIPLVA 321
             R    G  +++L  ++E++ ++ ++    +L+D+   L      + +   L  +  V 
Sbjct: 126 FDRTP-VGKLVTRLTNDVEALGEVFSTGAIGILSDIVSLLAIAIAMFWLQWQLALLLTVL 184

Query: 322 LLAMVLPGLLAQRRLARLANASMRESALRNAMLVESIQGLDEIKALQAEARFERQWNQYN 381
           LL      L  QRR  +    +  E +  NA L E++ G+  +++ + EA   +Q+   N
Sbjct: 185 LLPTTAVILYFQRRYRKANYRAREELSNLNASLQENMVGIGIVQSFRREAYNAQQFRVAN 244

Query: 382 AACAHTNLRLRTLTNGLVTWTQNVQGAVFAVVIVIGAPMVIAGDLTTGSLVAASMLSSRM 441
                   R     + +    + +  A  A V+ +G+ +V+   +  G L A  + S R+
Sbjct: 245 QRYLEAVDRTIFHDSAISATLEWISLAAIAAVLWLGSFLVLQDQMNFGLLAAFILYSQRL 304

Query: 442 MAPLAQLTHVLTRWQQAKVALQGLDKLMQSPVDHPEGEARVHLP---AIHGEYRLRQANF 498
             PL QL    T  Q    A++ +  +   P++  +      L    +  GE       F
Sbjct: 305 FDPLRQLAEKFTSIQAGFTAIERIVDIFNEPIEIRDAAQTQQLSLETSQSGEIHFENVWF 364

Query: 499 RYSEDYPPVLNIGRLDIQPGERIAVLGRNGAGKSTLLQALGGAMDLVQGEISLDGIAMAH 558
            Y  D P + N+  + IQPG+++A++G  GAGKST+++ L    +  QG I +DGI + +
Sbjct: 365 GYKPDEPVIQNLN-ITIQPGQKVALVGPTGAGKSTIIRLLCRLYEPTQGRILIDGIDIRN 423

Query: 559 LDPADLRRDVGLLPQYARLFHGTLRENLTLGAGQASDQELVAALAA-TGALDFVRRLPKG 617
           L   +LRR +G++ Q   LF G +  N+TLG  +  DQE V A A  T     +  LP+G
Sbjct: 424 LPQVELRRHLGVILQDGFLFAGDVSSNITLG--EPYDQEAVQAAARRTNVATLIESLPQG 481

Query: 618 MDHLILEGGLGLSGGQRQALVLSRLLVRQPQVLLLDEPTASLDDMTERKLLDNLERFCQG 677
               + E G  LSGGQRQ L  +R+ +R P+VL+LDE TA+LD  TE  + + L+     
Sbjct: 482 YATPLRERGTNLSGGQRQLLAFARVAIRDPKVLILDEATANLDVGTEALVQEALDDLLSD 541

Query: 678 RTLVIATHRLSVLQRVDRILVLDAGRIVIDDARDAALAK 716
           RT +I  HRLS ++  DRILVL  G+++ D + D  +A+
Sbjct: 542 RTAIIIAHRLSTIRNADRILVLRQGQLIEDGSHDVLMAR 580