Pairwise Alignments

Query, 722 a.a., Protein secretion ABC efflux system, permease and ATP-binding protein from Pseudomonas putida KT2440

Subject, 599 a.a., ABC transporter, ATP-binding protein MsbA (RefSeq) from Shewanella amazonensis SB2B

 Score =  173 bits (438), Expect = 3e-47
 Identities = 129/467 (27%), Positives = 228/467 (48%), Gaps = 26/467 (5%)

Query: 253 VYGHALRLRNS-VRPKSTGSFISQLR-ELESIRDLITSSTATVLAD----LPFFLLFLFV 306
           V+ H L L  S +  +++G+ IS++  + E I     S+  +++ D    +    L  + 
Sbjct: 120 VFEHYLTLPVSYIDKENSGNLISRVTFDTEQIARASGSALISIVRDGVTVIGMLGLMFYN 179

Query: 307 FWLIG-GVLVFIPLVALLAMVLPGLLAQRRLARLANASMRESALRNAMLVESIQGLDEIK 365
            W +   +L+  P++ L+   +      RR  +++           A+  + I+G   + 
Sbjct: 180 SWKLSLCILIVGPIIGLVIATV-----SRRFRKISRQIQSAMGGVTAVTEQMIKGHKNVL 234

Query: 366 ALQAEARFERQWNQYNAACAHTNLRLRTLTNGLVTWTQNVQGAVFAVVIVIGAPM--VIA 423
           A   +    +++ Q N    H N++L  +   +   T  + G+ FA+  V+ A     + 
Sbjct: 235 AFGGQETEAKRFAQVNDHNRHQNMKL-AVAQAISQPTIMIIGS-FALAFVLYAASFDALK 292

Query: 424 GDLTTGSLVAASMLSSRMMAPLAQLTHVLTRWQQAKVALQGLDKLMQSPVDHPEGEARVH 483
            +LT G+           + P+  LT V   +Q+   A   + +L+ +P +H +G     
Sbjct: 293 SELTAGTFATVLAAMMATLQPIKNLTRVNAEFQRGIAACTTVFELLDTPAEHDKGTFETE 352

Query: 484 LPAIHGEYRLRQANFRYSEDYPPVLNIGRLDIQPGERIAVLGRNGAGKSTLLQAL----G 539
              + G  R  Q  FRY       L+    D+ PG+ +A++GR+G+GKST+   +    G
Sbjct: 353 --RVKGHVRFEQVAFRYEGQEGRALDGISFDVPPGKTLALVGRSGSGKSTIASLINRFYG 410

Query: 540 GAMDLVQGEISLDGIAMAHLDPADLRRDVGLLPQYARLFHGTLRENLTLGAGQASDQELV 599
           G   L QG I LDG+ +      +LR  V L+ Q   LF+ T+  N+      A  +E +
Sbjct: 411 G---LEQGAIELDGVNVEDYRLKNLRSQVALVSQQVTLFNDTIANNIAYACPWAVTREQI 467

Query: 600 AALAATG-ALDFVRRLPKGMDHLILEGGLGLSGGQRQALVLSRLLVRQPQVLLLDEPTAS 658
              A    A++F+ +LP G+D  + E G+ LSGGQRQ + ++R ++R   VL+LDE T++
Sbjct: 468 EQAATLAHAMEFISKLPSGLDTQVGENGVLLSGGQRQRIAIARAMLRNAPVLILDEATSA 527

Query: 659 LDDMTERKLLDNLERFCQGRTLVIATHRLSVLQRVDRILVLDAGRIV 705
           LD  +E+ + + LE   Q RT ++  HRLS ++  D ILV++ GRIV
Sbjct: 528 LDTESEKAIQEGLENLRQNRTSIVIAHRLSTIESADEILVIEQGRIV 574