Pairwise Alignments

Query, 722 a.a., Protein secretion ABC efflux system, permease and ATP-binding protein from Pseudomonas putida KT2440

Subject, 585 a.a., Type I secretion system ATPase, PrtD (NCBI) from Rhodospirillum rubrum S1H

 Score =  216 bits (549), Expect = 3e-60
 Identities = 153/547 (27%), Positives = 270/547 (49%), Gaps = 14/547 (2%)

Query: 180 MIASLVANVLALAGVLFSMQVYDRVIPAESLPTLYVLFGGVVLALVFDFSMRLLRLKVTD 239
           M  S   N+L     L+ +QVYDRV+ + S  TL VL    V AL+    +  +R ++  
Sbjct: 33  MAFSFFINLLLFVSPLYMLQVYDRVLTSRSNSTLVVLTLAAVGALIVLGLIEAVRSRILV 92

Query: 240 LLGKRADLRVSDLVYGHALRLRNSVRPKSTGSFISQLRELESIRDLITSSTATVLADLPF 299
             G   D  ++  V+    +   +VR  + G +   LR+L+++R+ +T S   V  D P+
Sbjct: 93  RTGALIDTELNTRVFSSVFQ--QAVRRPAAG-YTQALRDLDTLREFLTGSGLIVFCDAPW 149

Query: 300 FLLFL---FVFWLIGGVLVFIPLVALLAMVLPGLLAQRRLARLANASMRESALRNAMLVE 356
             LF+   FV   + G++     + + A+ +   L  R L + A      +   N  +  
Sbjct: 150 APLFIALGFVLHPLLGLVSLFGAIVVFALAIVNNLGTRGLLKDAGTVSMHA---NNYVSS 206

Query: 357 SIQGLDEIKALQAEARFERQWNQYNAACAHTNLRLRTLTNGLVTWTQNVQGAVFAVVIVI 416
           S++  + ++A+   +  +R+W++ + A      +     + ++  +++ +  +   ++  
Sbjct: 207 SLRNAEVLEAMGMMSNIQRRWSERHDAVIGLQAKASDRASAVMAASKSFRMGLQVAILGT 266

Query: 417 GAPMVIAGDLTTGSLVAASMLSSRMMAPLAQLTHVLTRWQQAKVALQGLDKLMQSPVDHP 476
           GA + I  +++ G+++AAS++  R + P+      + +W+    A    ++L     ++ 
Sbjct: 267 GAYLAIHSEISPGTMIAASIIMGRALQPVEM---AVGQWKGLVAARGAYERLTDLLANNA 323

Query: 477 EGEARVHLPAIHGEYRLRQANFRYSEDYPPVLNIGRLDIQPGERIAVLGRNGAGKSTLLQ 536
            G+  + LP   G   L+Q          P L    LDI PGE + V+G + AGKSTL +
Sbjct: 324 AGKDTMTLPRPEGRVSLQQVVIVPPGSSVPALRGVTLDIAPGEVLGVIGPSAAGKSTLAR 383

Query: 537 ALGGAMDLVQGEISLDGIAMAHLDPADLRRDVGLLPQYARLFHGTLRENLTLGAGQASDQ 596
           AL G    VQG + LDG  + H    ++   +G LPQ   LF G++ EN+    G     
Sbjct: 384 ALVGVWPPVQGIVRLDGNDLRHWKSEEIGPHLGYLPQDVELFDGSVAENIA-RFGDIDPD 442

Query: 597 ELVAALAATGALDFVRRLPKGMDHLILEGGLGLSGGQRQALVLSRLLVRQPQVLLLDEPT 656
           +++AA    G  D V++LP+G D  I  GG  LSGGQRQ + L+R +   P +++LDEP 
Sbjct: 443 KVIAAARKAGVHDMVQKLPEGYDTKIGVGGQALSGGQRQRIALARAVYNDPVLVVLDEPN 502

Query: 657 ASLDDMTERKLLDNLERF-CQGRTLVIATHRLSVLQRVDRILVLDAGRIVIDDARDAALA 715
           ASLD   E  L+  ++     G+T+V+ TH+ ++L  VD +LVL  G + +   R   L+
Sbjct: 503 ASLDADGEAALMVAIDGMRAAGQTVVVITHKPTLLNAVDTVLVLKGGLVEMKGPRADVLS 562

Query: 716 KLQGAQA 722
           K    +A
Sbjct: 563 KFARPRA 569