Pairwise Alignments

Query, 722 a.a., Protein secretion ABC efflux system, permease and ATP-binding protein from Pseudomonas putida KT2440

Subject, 599 a.a., lipid A export ATP-binding/permease protein MsbA from Phaeobacter inhibens DSM 17395

 Score =  198 bits (504), Expect = 6e-55
 Identities = 162/558 (29%), Positives = 279/558 (50%), Gaps = 21/558 (3%)

Query: 173 LRPYGQVMIASLVANVLALAGVLFSMQVYDRVIPAESLPTLYVLFGGVVLALVFDFSMRL 232
           +RPY  +M  + +A VL     L       RV+    +    +L      ALV    + +
Sbjct: 30  MRPYRVLMAMATLALVLTAGLSLTLPLAVRRVVDNFRISEAALLNQYFAAALVIAALLAV 89

Query: 233 ---LRLKVTDLLGKR--ADLR--VSDLVYGHALRLRNSVRPKSTGSFISQLR-ELESIRD 284
              LR  +   LG+R  AD+R  V D V G +      +    TG  +S++  +   I+ 
Sbjct: 90  GTGLRYALVTRLGERVVADIRKAVFDRVIGMSPAFFEQIM---TGEVLSRITTDTTLIQS 146

Query: 285 LITSSTATVLADLPFFLLFLFVFWLIGGVLVFIPLVALLAMVLPGLLAQRRLARLANASM 344
           ++ SS +  L ++  F+  L +  L    L  + L+ + A+++P L+  RRL +++  + 
Sbjct: 147 VLGSSVSIALRNMLIFIGGLVLMLLTSAKLTSLVLLIVPAVIVPILVLGRRLRKISRENQ 206

Query: 345 RESALRNAMLVESIQGLDEIKALQAEARFERQWNQYNAACAHTNLRLRTLTNGLVTWTQN 404
              A  +    E++  +  ++A   E     ++++        ++R R  T   +T    
Sbjct: 207 DWIAASSGNAGEALGAVQTVQAYTHEVASRSEFSRLTETAFDVSMR-RIQTRAFLTVI-- 263

Query: 405 VQGAVFAVVIVI---GAPMVIAGDLTTGSLVAASMLSSRMMAPLAQLTHVLTRWQQAKVA 461
           V   VF+ V+ +   GA  V AG ++ G+LV   + +  +   +A L+ + +  Q+A  A
Sbjct: 264 VIFLVFSGVVGVLWMGANDVRAGIMSEGTLVQFVIYAVLVAGSVAALSEIWSELQRAAGA 323

Query: 462 LQGLDKLMQS--PVDHPEGEARVHLPAIHGEYRLRQANFRY-SEDYPPVLNIGRLDIQPG 518
            + L +L+ +   V  P     +  P + GE R    +FRY +    P L    L +QPG
Sbjct: 324 TERLVELLTAVDQVQDPYAPRALAAP-VRGEIRFDDVSFRYPARPQIPALVDVSLTVQPG 382

Query: 519 ERIAVLGRNGAGKSTLLQALGGAMDLVQGEISLDGIAMAHLDPADLRRDVGLLPQYARLF 578
           E +A +G +GAGK+T++Q +    D   G + LDG  +  L   D R+ + L+PQ   +F
Sbjct: 383 ETVAFVGPSGAGKTTIIQMIQRFYDPTSGAVCLDGRPLRDLQRDDFRQHIALVPQDPVIF 442

Query: 579 HGTLRENLTLGAGQASDQELVAALAATGALDFVRRLPKGMDHLILEGGLGLSGGQRQALV 638
             + R+N+  G   ASD E+ AA  A  A DF+  LP+G D  + E G+ LSGGQ+Q + 
Sbjct: 443 ALSARDNIRFGRPGASDAEVEAAARAAAAHDFISALPEGYDSQVGERGVMLSGGQKQRIA 502

Query: 639 LSRLLVRQPQVLLLDEPTASLDDMTERKLLDNLERFCQGRTLVIATHRLSVLQRVDRILV 698
           ++R ++R   VLLLDE T++LD  +ER +   ++   QGRT +I  HRL+ +++ DRI+V
Sbjct: 503 IARAILRDAPVLLLDEATSALDAESERLVQAAVDELSQGRTTLIVAHRLATVKKADRIVV 562

Query: 699 LDAGRIVIDDARDAALAK 716
           ++ GRI+     D  +A+
Sbjct: 563 MEEGRIIATGTHDQLVAE 580