Pairwise Alignments

Query, 722 a.a., Protein secretion ABC efflux system, permease and ATP-binding protein from Pseudomonas putida KT2440

Subject, 620 a.a., lipid ABC transporter ATPase/inner membrane protein (RefSeq) from Shewanella loihica PV-4

 Score =  187 bits (474), Expect = 2e-51
 Identities = 160/556 (28%), Positives = 269/556 (48%), Gaps = 26/556 (4%)

Query: 173 LRPY-GQVMIASLVANVLALAGVLFSMQV---YDRVIPAESLPTLYVLFGGVVLALVFDF 228
           LRPY G+V+ A +   + +LA +     V    D     E+   L  +   V+       
Sbjct: 40  LRPYRGKVIAAIVFLFIGSLAWLSLGQGVRLMVDEGFLRENGERLNEIILLVIGITALSS 99

Query: 229 SMRLLRLKVTDLLGKRADLRVSDLVYGHALRLRNSVRPK-STGSFISQLR-ELESIRDLI 286
           S    R  +   LG+R    +   VY H L+L      +  TG  IS+   +   ++ ++
Sbjct: 100 SAIFCRFYLMTWLGERVSADIRLKVYDHLLKLSPGFYARLRTGEVISRFTADATLLQSVV 159

Query: 287 TSSTATVLADLPFFLLFLFVFWLIGGVLVFIPLVALLAMVLPGLLAQRRLARLANASMRE 346
            SS +  L      +  L +  +    L  + L+A+  ++ P     R++  L+  S   
Sbjct: 160 GSSLSMALRASVTVVGGLVMMAITSLKLTALVLLAVPLVLGPIFFFGRKVRELSRKSQDR 219

Query: 347 SALRNAMLVESIQGLDEIKALQAEARFERQWNQYNAA---CAHTNLRLRTLTNGLVTWTQ 403
                A + ES+  +  ++A   E R  + +++   A    A   ++ R +   LV +  
Sbjct: 220 VGDLGAYVDESLHEIHTVQAYCHEDRDRQLFSERVEAVMEAARGRIKYRAILISLVMFLS 279

Query: 404 NVQGAVFAVVIVIGAPMVIAGDLTTGSLVAASMLSSRMMAPLAQLTHVLTRWQQAKVALQ 463
            +     A++  +GA  V++  +T G L A    +  +   +A ++ V+   Q+A  A +
Sbjct: 280 IL---AIALITWVGAKDVMSEAITPGELSAFMFYAVMVAGAVATISEVIGEIQRAAGATE 336

Query: 464 GLDKLMQSPVDHPEGEARVHLPA-IHGEYRLRQANFRY-------------SEDYPPVLN 509
            L +L+++P+D P     V LPA + GE  L Q  F Y             ++    V+ 
Sbjct: 337 RLIELVETPIDIPLAPKPVSLPAKVRGELSLEQVRFSYPVQASADSAEEMEAQAGVEVIR 396

Query: 510 IGRLDIQPGERIAVLGRNGAGKSTLLQALGGAMDLVQGEISLDGIAMAHLDPADLRRDVG 569
              L I PGER+A++G +GAGKSTL + L     L  G I+LDGI +A L P DLR+   
Sbjct: 397 GLSLHIAPGERVALVGASGAGKSTLFELLQRFYVLDSGVIALDGIDIASLRPQDLRQQYA 456

Query: 570 LLPQYARLFHGTLRENLTLGAGQASDQELVAALAATGALDFVRRLPKGMDHLILEGGLGL 629
           L+PQ + +F  ++ EN+  G   AS +E+ AA  A  A +F+    +G    + E G+ L
Sbjct: 457 LVPQESVIFATSVLENVRYGRPDASLEEVQAACVAARADEFIADFSEGYQTYLGERGVRL 516

Query: 630 SGGQRQALVLSRLLVRQPQVLLLDEPTASLDDMTERKLLDNLERFCQGRTLVIATHRLSV 689
           SGGQ+Q + ++R ++    VLLLDE T++LD ++E+K+   L+   QGRT +I  HRL+ 
Sbjct: 517 SGGQKQRIAIARAILADRPVLLLDEATSALDAVSEQKVKQALDVLMQGRTTLIIAHRLAT 576

Query: 690 LQRVDRILVLDAGRIV 705
           +   DRILV+D G ++
Sbjct: 577 VLNADRILVMDKGELI 592