Pairwise Alignments

Query, 722 a.a., Protein secretion ABC efflux system, permease and ATP-binding protein from Pseudomonas putida KT2440

Subject, 699 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

 Score =  184 bits (467), Expect = 1e-50
 Identities = 151/544 (27%), Positives = 257/544 (47%), Gaps = 16/544 (2%)

Query: 170 LRDLRP-YGQVMIASLVANVLALAGVLFSMQVYDRVIPAESLPTLYVLFGGVVLALVFDF 228
           L  LRP Y  +   SL++++  LA  LF+M VYDRVI  ++   L  +  G  LAL    
Sbjct: 133 LAKLRPWYRPIFWLSLLSSLSGLAIPLFTMAVYDRVIGGQAPQILPSIALGAALALGIFV 192

Query: 229 SMRLLRLKVTDLLGKRADLRVSDLVYGHALRLRNSVRPK-STGSFISQLRELESIRDLIT 287
           + RLLR +    +  R    +S + +   L +  S+  +    S I+++R  E +R L+ 
Sbjct: 193 ASRLLRAQALANVSNRFARDLSGITFNRLLSMPLSLLSRVGLSSHIARMRNAEKVRSLVA 252

Query: 288 SSTATVLADLPFFLLFLFVFWLIGGVLVFIPLVALLAMVLPGLLAQRRLARLANASMR-- 345
                 L DLPF L+ L    L+ GVLV +PL     M+L   L  + L +   A+    
Sbjct: 253 GPGGGGLIDLPFTLIALVAITLLSGVLVLVPL----GMLLLFYLVMKALDKFTQAAAPTI 308

Query: 346 ESALRNAMLVESIQGLDEIKALQAEARFERQWNQYNAACAHTNLRLRTLTNGLVTWTQNV 405
               +N++   S   L    A ++ A +E+   +    C    L  +    GL     + 
Sbjct: 309 SGEYQNSLNELSTHLLPLKSAGESGAWYEQFMRRAREHCRQNFLYSKRA--GLNAAVAHA 366

Query: 406 QGAVFAVVIVI-GAPMVIAGDLTTGSLVAASMLSSRMMAPLAQLTHVLTRWQQAKVALQG 464
            G   A+  V  G  +V+   +T G+L+A  ML  R+  P         ++   K A+  
Sbjct: 367 MGLFTALATVFTGIFLVLNQSITPGALIACVMLIWRITGPAQLAFASRQKFTLLKGAVDQ 426

Query: 465 LDKLMQSPVDHPEGEARVHLPAIHGEYRL--RQANFRYSEDYPPVLNIGRLDIQPGERIA 522
            D+ M    +    E R+  P ++    L  +    RYS D  P L+   LDI+ GE +A
Sbjct: 427 FDRFMGVTTEF--NELRLDSPNLNQTPALSFKHVTLRYSADSEPALSGVTLDIETGETVA 484

Query: 523 VLGRNGAGKSTLLQALGGAMDLVQGEISLDGIAMAHLDPADLRRDVGLLPQYARLFHGTL 582
           ++G NG+GK++LL    G ++   G ++++G  +   DP   R+     P  + +  GTL
Sbjct: 485 IIGPNGSGKTSLLLTAIGVIEPQAGFVTVNGKNLKQFDPEIFRQWAAYSPTNSEILPGTL 544

Query: 583 RENLTLGAGQASDQELVAALAATGALDFVRRLPKGMD-HLILEGGLGLSGGQRQALVLSR 641
            +NL L   +ASD+EL  AL   G    ++ L + +D +L   G    S  +   + L+R
Sbjct: 545 ADNLRLAKPEASDEELKQALTDAGGASLLQALKQNIDANLFSRGTSMFSAVESSYISLAR 604

Query: 642 LLVRQPQVLLLDEPTASLDDMTERKLLDNLERFCQGRTLVIATHRLSVLQRVDRILVLDA 701
            L++   +L++DEP A+ +    +  +  L+R     T++  TH  +++Q+ D++++LD 
Sbjct: 605 ALLKGSPLLVMDEPIANRNPFARQAFIQTLKRLKGKTTILFTTHDQALIQQADKVVILDK 664

Query: 702 GRIV 705
           G +V
Sbjct: 665 GTVV 668