Pairwise Alignments

Query, 722 a.a., Protein secretion ABC efflux system, permease and ATP-binding protein from Pseudomonas putida KT2440

Subject, 726 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

 Score =  377 bits (967), Expect = e-108
 Identities = 232/713 (32%), Positives = 374/713 (52%), Gaps = 12/713 (1%)

Query: 13  APAPEQ---AAAHRPDLGPWLEVMLQVAHHYRLDVSPQRIRLAAAEDARPLN-EILRHMA 68
           +P  EQ   +A+ R  + P L+ ++ +  ++    S + +          L  E++   A
Sbjct: 6   SPKTEQWTVSASQRVTVDPLLDSLVLLTEYFGSPCSSESLAAGLPLSGSILTPELVPQAA 65

Query: 69  RQAGLALRFVHFDAKGLRQWRTPLVLELDDGQLAVVESVTEEDDLAVVFAGDQGLTSRLP 128
            +AGLA +        +     P +L L D    ++  +  + D AV+   + G    L 
Sbjct: 66  GRAGLAAKLTRKGLDQISPILLPCILLLKDKNACLLREIDIDKDRAVIQLPETGGEEELS 125

Query: 129 RDTLKGRISRVALLRPARPLRDVRTDDYTAPYDRHWFARIVLRDLRP-YGQVMIASLVAN 187
            + L+        L   +   D+  D +      HW  +  L+D  P Y   +IAS++ N
Sbjct: 126 IEALEAMYVGYLFLVKQQYRGDMGLDLHLHDSRTHWLIQ-TLKDSAPIYRDALIASVLVN 184

Query: 188 VLALAGVLFSMQVYDRVIPAESLPTLYVLFGGVVLALVFDFSMRLLRLKVTDLLGKRADL 247
           + AL   LF M VYD+V+P  +  +L+VL  G  +A +FD  MR LR  + D+ GK+ D+
Sbjct: 185 LFALVSPLFIMNVYDKVVPNLAFESLWVLAIGAGIAYIFDLIMRQLRAYLIDVAGKKVDI 244

Query: 248 RVSDLVYGHALRLRNSVRPKSTGSFISQLRELESIRDLITSSTATVLADLPFFLLFLFVF 307
            VS  ++  A+ +    R  S G    QL E +SIR+++TS+T T L DLPF L F+ + 
Sbjct: 245 IVSSRLFAKAIGIPLEKRSPSIGGMARQLGEFDSIREILTSATITTLVDLPFALFFMLII 304

Query: 308 WLIGGVLVFIPLVALLAMVLPGLLAQRRLARLANASMRESALRNAMLVESIQGLDEIKAL 367
           +++ G L  IP++    ++   LL Q RL      S + S+L++  L+ES+  ++ IK+ 
Sbjct: 305 YIVAGDLAIIPVIGGCIIIGYTLLMQPRLKAAIEESNKFSSLKHGHLIESLASIESIKSS 364

Query: 368 QAEARFERQWNQYNAACAHTNLRLRTLTNGLVTWTQNVQGAVFAVVIVIGAPMVIAGDLT 427
            AE   ++ W Q     A+  L+++ ++  +              V+++G   V   D++
Sbjct: 365 GAEGLVQKSWQQMIGHTANWQLKVKKISTSVTNVANFTVQLSVVCVVILGVYRVADNDIS 424

Query: 428 TGSLVAASMLSSRMMAPLAQLTHVLTRWQQAKVALQGLDKLMQSPVDHPEGEARVHLPAI 487
            G ++AA +LSSR ++P+AQL  ++TR      AL+ LD++M       E E + HL + 
Sbjct: 425 MGGIIAAVILSSRAISPMAQLAGLMTRGNHTASALRQLDQIM---TQEDEFENKGHLVSK 481

Query: 488 H---GEYRLRQANFRYSEDYPPVLNIGRLDIQPGERIAVLGRNGAGKSTLLQALGGAMDL 544
           H   G+      +F Y     PVL+   L I PGERIA++GRNG+GKSTL + L G    
Sbjct: 482 HRLKGQINADHVSFNYPGSERPVLHPMSLSIAPGERIAIIGRNGSGKSTLAKLLVGLYQP 541

Query: 545 VQGEISLDGIAMAHLDPADLRRDVGLLPQYARLFHGTLRENLTLGAGQASDQELVAALAA 604
            +G +  DG+  A + P DLRR+ G LPQ   LFHGT+R+N+  G  Q ++ +L+ A+  
Sbjct: 542 TKGSLRYDGLDSAQIHPTDLRRNFGYLPQDITLFHGTIRDNILFGTRQVTEHQLIRAVQL 601

Query: 605 TGALDFVRRLPKGMDHLILEGGLGLSGGQRQALVLSRLLVRQPQVLLLDEPTASLDDMTE 664
           +G   F     +G+D  + EGG  LS GQRQ + L+R  +  P VLL+DEPTASLD   E
Sbjct: 602 SGVNQFTDIETEGLDQQVGEGGQSLSRGQRQTIALARATLNDPPVLLMDEPTASLDARAE 661

Query: 665 RKLLDNLERFCQGRTLVIATHRLSVLQRVDRILVLDAGRIVIDDARDAALAKL 717
           ++ +  +    + RTL++ TH++ +L  VDRILVLD G +V D  ++  L +L
Sbjct: 662 KQFIRAMRNVSKERTLLLITHKMHLLNLVDRILVLDRGHLVADGPKEQVLNQL 714