Pairwise Alignments

Query, 722 a.a., Protein secretion ABC efflux system, permease and ATP-binding protein from Pseudomonas putida KT2440

Subject, 725 a.a., toxin secretion ABC transporter, ATP-binding subunit/permease protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  185 bits (469), Expect = 8e-51
 Identities = 139/534 (26%), Positives = 256/534 (47%), Gaps = 16/534 (2%)

Query: 179 VMIASLVANVLALAGVLFSMQVYDRVIPAESLPTLYVL---FGGVVLALVFDFSMRL-LR 234
           +++ S++  V AL    +   V D V+ ++  P L VL   FG +V+  VF   +R  L 
Sbjct: 189 LLLLSVLLQVFALVTPYYMQWVVDEVLVSQDQPLLIVLAIGFGLLVVINVFTTGVRSWLV 248

Query: 235 LKVTDLLGKRADLRVSDLVYGHALRL-RNSVRPKSTGSFISQLRELESIRDLITSSTATV 293
           L+V+ LL  +  + +      H LRL  N    +  G  +S+   L  +R+ +T+     
Sbjct: 249 LRVSSLLNMQMGVNL----LRHLLRLPMNYFEKRHIGDLVSRFGSLAQVRERLTTGLVET 304

Query: 294 LADLPFFLLFLFVFWLIGGVLVFIPLVALLAMVLPGLLAQRRLARLANASMRESALRNAM 353
           + D    +  L +  +    L  + + A+    L      R L R    S++  A   + 
Sbjct: 305 VVDGVMSIAVLVMMLIYSVKLTLVVMAAVALYTLMRFALYRPLHRATEESIQAKAKEQSN 364

Query: 354 LVESIQGLDEIKALQAEARFERQWNQYNAACAHTNLRLRTLTNGLVTWTQNVQGAVFAVV 413
            +E+I+G+  IK    E+  +  W    +   + ++RL  L        + + G    +V
Sbjct: 365 FLENIRGIQTIKLFTCESARQGIWQNRYSEVINADIRLGRLKISFDAMNKLLFGVENIIV 424

Query: 414 IVIGAPMVIAGDLTTGSLVAASMLSSRMMAPLAQLTHVLTRWQQAKVALQGL-DKLMQSP 472
           I + A +V++G LT G ++A     ++M   +A L   L  ++  ++ L  + D  +   
Sbjct: 425 IYMAAMIVMSGGLTIGMVLAFIAYKNQMTERVASLIEQLIMFRMLRLHLDRISDIALHEQ 484

Query: 473 VDHPEGEARVHLPAIHGEYRLRQANFRYSEDYPPVLNIGRLDIQPGERIAVLGRNGAGKS 532
             H EG   +++  + G   L   +FRY E+ P V++   LDIQ GE +A++G +G GK+
Sbjct: 485 EAHQEGFTPLNV--VKGRLSLENVSFRYGENEPEVVSNLSLDIQAGESVAIVGASGCGKT 542

Query: 533 TLLQALGGAMDLVQGEISLDGIAMAHLDPADLRRDVGLLPQYARLFHGTLRENLTLGAGQ 592
           TL++ + G +    G I LDG A+  +     R+ +  + Q   L  G++ +N+T    +
Sbjct: 543 TLVKLMLGLLVPSSGRILLDGQAIQQIGLTQYRQQIAAVMQDDTLLSGSIADNITFFDPE 602

Query: 593 ASDQELVAALAATGALDF-VRRLPKGMDHLILEGGLGLSGGQRQALVLSRLLVRQPQVLL 651
            +  ++    A    +D  +  +P G + L+ + G   SGGQ Q L+L+R L + P +L 
Sbjct: 603 PNYVKM-QQCAQLAVIDMDIAHMPMGYNSLVGDMGNQFSGGQVQRLLLARALYQSPSILF 661

Query: 652 LDEPTASLDDMTERKLLDNLERFCQGRTLVIATHRLSVLQRVDRILVLDAGRIV 705
           +DE T+ LD M E K+ + ++      T +I  HR   +++ DR++V+  G+I+
Sbjct: 662 MDEATSHLDIMNEAKISEQIKNL--NMTRIIIAHRPETIKQADRVVVMHQGKIM 713