Pairwise Alignments

Query, 722 a.a., Protein secretion ABC efflux system, permease and ATP-binding protein from Pseudomonas putida KT2440

Subject, 549 a.a., toxin secretion ABC transporter protein, HlyB family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  182 bits (463), Expect = 3e-50
 Identities = 136/523 (26%), Positives = 252/523 (48%), Gaps = 14/523 (2%)

Query: 169 VLRDLRPYGQVMIASLVANVLALAGVLFSMQVYDRVIPAESLPTLYVLFGGVVLALVFDF 228
           +L   + + +++++S + NVL+LA     +Q+YDR++P E+  T  VL  GV +A++ + 
Sbjct: 7   LLAQHKSFTELLLSSTLINVLSLALPFTMLQIYDRILPNEAYGTASVLAIGVGIAILLEL 66

Query: 229 SMRLLRLKVTDLLGKRADLRVSDLVYGHALRLR-NSVRPKSTGSFISQLRELESIRDLIT 287
            +R  R  +  L     +L+ +       ++   + V    +G  +  +  + ++R++ +
Sbjct: 67  VLRYTRSWLLALNASNYELQTTAQFVDRLMKADYHHVEQLGSGKILHGITSIATMREIYS 126

Query: 288 SSTATVLADLPFFLLFLFVFWLIGGVLVFIPLVALLAMVLPGLLAQRRLARLANASMRES 347
              A  L D PF ++FL +   IGG LVFIP+   L   + G+    ++ +  + + RE 
Sbjct: 127 GQAAVALMDFPFVIIFLALVAYIGGPLVFIPI---LVWGIAGI-GVWQIGKKLSVATREL 182

Query: 348 AL----RNAMLVESIQGLDEIKALQAEARFERQWNQYNAACAHTNLRLRTLTNGLVTWTQ 403
           A+    R  +L+  + GL   K+L  E+R    + + N         +  L++ L  W Q
Sbjct: 183 AISDDERTRLLILVLSGLTTAKSLALESRITYAYKKINYQRLAQQNEVDWLSSQLQEWIQ 242

Query: 404 NVQGAVFAVVIVIGAPMVIAGDLTTGSLVAASMLSSRMMAPLAQLTHVLTRWQQAKVALQ 463
               A    +++IG   V+ GDLTTG L A S+L+ R +APL+ +  +  ++  A+ A+Q
Sbjct: 243 GASQATTLALVLIGCFEVLNGDLTTGGLAACSILAGRAVAPLSAIGSLKAKFVTAQSAMQ 302

Query: 464 GLDKLMQSPVDHPEGEARVHLPAIHGEYRLRQANFRYSEDYPPVLNIGRLDIQPGERIAV 523
            +++++ SP +   G          G  +  Q + + +      +N   L I  G  + V
Sbjct: 303 DVNEIIASPPESLNGTQVYQQKLPSGPIQFEQVSAQQTGAKLKQIN---LTIPAGSLVTV 359

Query: 524 LGRNGAGKSTLLQALGGAMDLVQGEISLDGIAMAHLDPADLRRDVGLLPQYARLFHGTLR 583
                   S LL  +GG   + +G I +D I +   DP + R+ +  +  +A L  G++ 
Sbjct: 360 TSNPLTHASLLLSTVGGYHQVTEGAIKIDSIPLTEHDPLEYRQSISYVSPWATLLAGSIL 419

Query: 584 ENLTLGAGQASDQELVAALAATGALDFVRRLPKGMDHLI-LEGGLGLSGGQRQALVLSRL 642
           +NLTL   +     +V A    G    + +LP G   L+       L+ G  + + + R 
Sbjct: 420 DNLTLFRHEREAYAMVLA-DKLGLSATIAQLPAGYQTLVGNNDSQMLNKGAIKLIAIVRA 478

Query: 643 LVRQPQVLLLDEPTASLDDMTERKLLDNLERFCQGRTLVIATH 685
           L + P +LLLDEP  SLD  ++++LL  L       TL++A++
Sbjct: 479 LAQSPSILLLDEPMVSLDADSQQRLLALLLELKNHITLIVASY 521