Pairwise Alignments

Query, 722 a.a., Protein secretion ABC efflux system, permease and ATP-binding protein from Pseudomonas putida KT2440

Subject, 595 a.a., ABC transporter, ATP-binding/permease protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  195 bits (495), Expect = 6e-54
 Identities = 152/476 (31%), Positives = 240/476 (50%), Gaps = 19/476 (3%)

Query: 241 LGKRADLRVSDLVYGHALRLRNSVRPK-STGSFISQLRELESIRDLITSSTATVLADLPF 299
           LG+R    +   VY   L+L  +   K  TG  IS+     ++   +  S+ ++   L  
Sbjct: 95  LGERVSADIRLAVYNQLLKLSPAFYAKVRTGEVISRFTADSTLLQTVVGSSLSMA--LRS 152

Query: 300 FLLFLFVFWLIGGVLVFIPLVALLAMVL---PGLLAQRRLARLANASMRESALRNAMLVE 356
            +  +    ++G   V + L+ LLA+ L   P     R++  LA  S    A   A + E
Sbjct: 153 GVTVIGGLAMMGITSVKMTLLVLLAVPLVLGPVSFFGRKVRTLARESQDRVADLGAYVDE 212

Query: 357 SIQGLDEIKALQAEARFERQWNQYNA------ACAHTNLRLRTLTNGLVTWTQNVQGAVF 410
           +   L EI  +QA    ++  + +N         A   +R R L   L++    +  A  
Sbjct: 213 T---LHEIHTVQAYGHEDKDRSLFNGRVEDVMTAASGRIRYRAL---LISSVMFLSIAAI 266

Query: 411 AVVIVIGAPMVIAGDLTTGSLVAASMLSSRMMAPLAQLTHVLTRWQQAKVALQGLDKLMQ 470
           A+V  +GA  V++G +T G L A    +  +   +A ++ V+   Q+A  A + L +L +
Sbjct: 267 ALVTWVGAHDVMSGKMTGGELSAFMFYAVMVAGAVATISEVVGEIQRASGAAERLIELAE 326

Query: 471 SPVDHPEGEARVHLPA-IHGEYRLRQANFRYSEDYPPVLNIGRLDIQPGERIAVLGRNGA 529
           + VD P       LP  + GE +L Q NF Y E    VL+   L I  GER+A++G +GA
Sbjct: 327 TEVDIPAPLVPKTLPTKVRGELQLHQLNFHYPEQTQLVLSDLNLVINAGERVALVGPSGA 386

Query: 530 GKSTLLQALGGAMDLVQGEISLDGIAMAHLDPADLRRDVGLLPQYARLFHGTLRENLTLG 589
           GKSTL Q L        G I LDGI +A L P DLR    L+PQ + +F  ++ EN+  G
Sbjct: 387 GKSTLFQLLQRFYVPSSGSILLDGIDIAALSPQDLRAQFALVPQDSVIFATSVLENVRYG 446

Query: 590 AGQASDQELVAALAATGALDFVRRLPKGMDHLILEGGLGLSGGQRQALVLSRLLVRQPQV 649
              AS+QE++ A  A  A +F+    +G    + E G+ LSGGQ+Q + ++R ++    +
Sbjct: 447 RVDASEQEVIDACIAARAHEFISEFSEGYQTYLGERGVRLSGGQKQRIAIARAILADRPI 506

Query: 650 LLLDEPTASLDDMTERKLLDNLERFCQGRTLVIATHRLSVLQRVDRILVLDAGRIV 705
           LLLDE T++LD ++E+K+   L+    G+T +I  HRL+ +   DRI+V D GRIV
Sbjct: 507 LLLDEATSALDALSEQKVKQALDELMAGKTTLIIAHRLATVINADRIIVFDKGRIV 562