Pairwise Alignments

Query, 394 a.a., Protein secretion ABC efflux system, membrane fusion protein from Pseudomonas putida KT2440

Subject, 440 a.a., HlyD family secretion protein from Pseudomonas fluorescens FW300-N2E2

 Score =  141 bits (355), Expect = 4e-38
 Identities = 118/416 (28%), Positives = 186/416 (44%), Gaps = 52/416 (12%)

Query: 15  DDQAVFRAGRIITLCALMLAAFLAWAAWFEVTEVSTGTGKVIPSSREQVIQSFEGGIVAQ 74
           DD  V R G ++ L    L  F  WAA   +   +   G V   S  + +Q  EGGIV +
Sbjct: 18  DDTPVRRVGYLMLLVTFGL--FGGWAALAPLDSSALAPGVVTVKSYRKTVQHLEGGIVRE 75

Query: 75  MSVAEGDLVERGQVLAQLDPTKTASSVGESEAKYRAARASQARLQAE--VTGKPLTFPES 132
           + V +GDLV+ G VL  LD T+  S +  + ++  AA   QARL+AE     +PL  P  
Sbjct: 76  LRVHDGDLVKTGDVLLVLDNTQARSEMETTRSQLIAALQLQARLEAERDALPEPLAVPAL 135

Query: 133 LRDSP---DLIDAETALYQTRRRGL-------EQTLAGIQDSL----------------- 165
               P   +  D+E  ++QTRR  L       E+T+  I++ +                 
Sbjct: 136 DPADPRVQEARDSEARIFQTRRTSLLGEIGLQEKTIGQIEEQIRGFKAIIASKQALAASY 195

Query: 166 ------------------QLVRSELKITENLAKMGASSRVEVIRLNRQRSELELKANEAR 207
                             Q +R + +    L    A S+ E+ + +    E  LK  + +
Sbjct: 196 QEEIVDLRALLAEGYVDKQRLREQERSLSRLQTEIAESQSEIAQAHVHIDEARLKILQLK 255

Query: 208 SDYLVRAREELAKASAEADALSEVIRGRSDSLTRLTLRSPVRGIVKDIEVNTLGGVVQPG 267
             +       L  A  +   L E +    D   R  + +P  G+V  + V+TLG VV PG
Sbjct: 256 KTFASEVAGLLGDARTKVYELRERLATLQDRDQRTDILAPESGMVMGMTVHTLGAVVSPG 315

Query: 268 GQVMKIVPMDERLLIETRIAPRDIAFIHPDQAAKVKISAYDYSVYGGLDGKVVGISPDTL 327
             ++ IVP +E L+IE +++P DI  I   + A ++ SA+  S    ++G++V IS D L
Sbjct: 316 TALLDIVPANEELIIEAQVSPMDIDRIALGKLADIRFSAFKSSTTPVIEGQLVQISADRL 375

Query: 328 QDEVKPEIYYYRVFIRTEQDSLQNKAGKRFAIVPGMIATVDIRTGEKTILDYLIKP 383
            ++     YY      T++     +A     +VPGM   V + TG +T+L YLI+P
Sbjct: 376 INKDTGTAYYLARVALTDKG---RQALGNLTLVPGMPVEVLVNTGARTLLQYLIQP 428