Pairwise Alignments

Query, 394 a.a., Protein secretion ABC efflux system, membrane fusion protein from Pseudomonas putida KT2440

Subject, 445 a.a., Type I secretion system, membrane fusion protein LapC from Pseudomonas fluorescens FW300-N2E2

 Score =  260 bits (665), Expect = 5e-74
 Identities = 159/404 (39%), Positives = 230/404 (56%), Gaps = 47/404 (11%)

Query: 36  FLA-WAAWFEVTEVSTGTGKVIPSSREQVIQSFEGGIVAQMSVAEGDLVERGQVLAQLDP 94
           FLA WA +  + EV+ G GK IPSS+ Q +Q+ EGGIVA++ V EG +VE G  L +LD 
Sbjct: 44  FLALWANFAVIDEVTKGDGKAIPSSKIQKVQNLEGGIVAELFVKEGQIVEAGAPLIRLDD 103

Query: 95  TKTASSVGESEAKYRAARASQARLQAEVTGKPLTFP-ESLRDSPDLIDAETALYQTRRRG 153
           T+  S+VGE+EA   +      RL AEV  +PL FP + L+  P    +E +LY +RR+ 
Sbjct: 104 TRFVSNVGETEADRLSMLLRVERLSAEVDDRPLNFPADVLKAVPGQAASEESLYISRRQQ 163

Query: 154 LEQTLAGIQDSL---------------------QLVRSELKITENLAKMGASSRVEVIRL 192
           L   + G+Q+ L                      L R E+ ++E L   GA S VEV+RL
Sbjct: 164 LHDEIGGLQEQLIQRQQELREFVSKQAQYRSGLALQRQEINMSEPLVAQGAVSPVEVLRL 223

Query: 193 NRQR---------------------SELELKANEARSDYLVRAREELAKASAEADALSEV 231
            R                        E++ K +E R  +   A  +L +A  + +     
Sbjct: 224 KRAEVETRGQLDATTLAIPRAESAIKEVQRKIDETRGKFRSDALTQLNEARTDLNKAQAT 283

Query: 232 IRGRSDSLTRLTLRSPVRGIVKDIEVNTLGGVVQPGGQVMKIVPMDERLLIETRIAPRDI 291
            +   D ++R  + SPVRGIV  + VNT+GGV+QPG  +++IVP+D+ +L+E +I P+DI
Sbjct: 284 GKALEDRVSRTLVTSPVRGIVNKLLVNTIGGVIQPGSDLVEIVPLDDTILVEAKIRPQDI 343

Query: 292 AFIHPDQAAKVKISAYDYSVYGGLDGKVVGISPDTLQDEVKPEIYYYRVFIRTEQDSLQN 351
           AF+HP Q A VK +AYDY++YGG+  K+  I  DT+ DE K   YY  + +RTE+  L  
Sbjct: 344 AFLHPGQDATVKFTAYDYTIYGGMKAKLEQIGADTITDEDKKTTYYI-IKLRTERSHLGT 402

Query: 352 KAGKRFAIVPGMIATVDIRTGEKTILDYLIKPLNRAK-EALRER 394
              K   I+PGM+A+VDI TG+KT+L YL+KP+ +A+ EAL ER
Sbjct: 403 DE-KPLLIIPGMVASVDIITGKKTVLSYLLKPIIKARAEALHER 445