Pairwise Alignments

Query, 394 a.a., Protein secretion ABC efflux system, membrane fusion protein from Pseudomonas putida KT2440

Subject, 454 a.a., HlyD family secretion protein from Pseudomonas fluorescens FW300-N2E2

 Score =  265 bits (676), Expect = 3e-75
 Identities = 157/413 (38%), Positives = 239/413 (57%), Gaps = 47/413 (11%)

Query: 26  ITLCALMLAAFLAWAAWFEVTEVSTGTGKVIPSSREQVIQSFEGGIVAQMSVAEGDLVER 85
           + L A+++   L WA    + EV+TG GK IPSS+ QVIQ+ EGGIV ++ V EG +V +
Sbjct: 45  VWLAAVLIVTGLVWAKLAVLQEVTTGEGKAIPSSKIQVIQNLEGGIVTEIFVREGQMVNK 104

Query: 86  GQVLAQLDPTKTASSVGESEAKYRAARASQARLQAEVTGKPLTFP-ESLRDSPDLIDAET 144
           G  L +LD T+  S+ GESEA   A  A   RL AE  G+P     E +  +P + + E 
Sbjct: 105 GDTLLRLDDTRYQSNKGESEADRYALTAQVERLSAEAEGRPFNLSAEVIAKAPQVAEDER 164

Query: 145 ALYQTRRRGLE--------------QTLAGIQD-------SLQLVRSELKITENLAKMGA 183
           +LY+ R+R L               Q LA  +        +L L++ E+ ++  L + GA
Sbjct: 165 SLYEQRQRRLASEQRTLTEQLRQKTQELAEFRSKQGQFSSALALLQEEMNMSAPLVRTGA 224

Query: 184 SSRVEVIRLNRQR---------------------SELELKANEARSDYLVRAREELAKAS 222
            S VE++RL R                       +E++ K +E+   +   A ++L +  
Sbjct: 225 VSPVEILRLKRSAVEIRGSLNATTLAIPRAESAINEIKSKIDESEQTFRSEAAKDLNEKR 284

Query: 223 AEADALSEVIRGRSDSLTRLTLRSPVRGIVKDIEVNTLGGVVQPGGQVMKIVPMDERLLI 282
            E   ++       D +TR T+ SPV G++K ++VNT+GGVVQPG  +++IVP+++ LLI
Sbjct: 285 TELSKITASSIAIDDRVTRTTVVSPVHGVIKQLKVNTIGGVVQPGNDMVEIVPLEDNLLI 344

Query: 283 ETRIAPRDIAFIHPDQAAKVKISAYDYSVYGGLDGKVVGISPDTLQDEVKPEIYYYRVFI 342
           E ++ P+D+AF+HP Q A VK SAYDY++YGGL  K+  I  DT+ D+      +Y + +
Sbjct: 345 EAKVRPQDVAFLHPGQKAMVKFSAYDYTIYGGLSAKLELIGADTITDDKGNS--FYLIQV 402

Query: 343 RTEQDSLQNKAGKRFAIVPGMIATVDIRTGEKTILDYLIKPLNRAK-EALRER 394
           RT+++ L   A K   I+PGM+ATVDI TGEK++LDYL+KP+ +A+ EA+RER
Sbjct: 403 RTDKNHLGGDA-KPLLIIPGMVATVDIITGEKSVLDYLLKPVLKARTEAMRER 454