Pairwise Alignments

Query, 394 a.a., Protein secretion ABC efflux system, membrane fusion protein from Pseudomonas putida KT2440

Subject, 455 a.a., hemolysin secretion protein D from Pseudomonas fluorescens FW300-N2E3

 Score =  269 bits (688), Expect = 1e-76
 Identities = 165/421 (39%), Positives = 240/421 (57%), Gaps = 50/421 (11%)

Query: 22  AGRIITLCALMLAAF----LAWAAWFEVTEVSTGTGKVIPSSREQVIQSFEGGIVAQMSV 77
           A R++ L    +  F    L WA +  + EV+ G GK IPSS+ Q IQ+ EGGIVA++ V
Sbjct: 37  APRVVRLTIWAIIGFFLFLLLWANFAVIDEVTKGDGKAIPSSKLQKIQNLEGGIVAELFV 96

Query: 78  AEGDLVERGQVLAQLDPTKTASSVGESEAKYRAARASQARLQAEVTGKPLTFPE-SLRDS 136
            EG +VE G  L +LD T+  S+VGE+EA   +      RL AEV  +PL+FP+ +++  
Sbjct: 97  REGQIVEAGAPLIRLDDTRFKSNVGETEADRLSMLLRVERLSAEVDDRPLSFPDDAMKAV 156

Query: 137 PDLIDAETALYQTRRRGLEQTLAGIQDSL---------------------QLVRSELKIT 175
           P    +E +LY++RR+ L   + G+Q+ L                      L R E+ ++
Sbjct: 157 PGQAASEKSLYESRRQQLHDEVGGLQEQLIQKQQELREFTSKQAQYRSGLALQRQEINMS 216

Query: 176 ENLAKMGASSRVEVIRLNRQR---------------------SELELKANEARSDYLVRA 214
           E L   GA S VEV+RL R                        E++ K +E R  +   A
Sbjct: 217 EPLVAQGAVSPVEVLRLKRAEVETRGQLDATTLAIPRAESAIKEVQRKIDETRGKFRSEA 276

Query: 215 REELAKASAEADALSEVIRGRSDSLTRLTLRSPVRGIVKDIEVNTLGGVVQPGGQVMKIV 274
             +L +A  + +      +   D ++R  + SPVRGIVK + VNT+GGV+QPG  +++IV
Sbjct: 277 LTQLNEARTDLNKAKATGKALEDRVSRTLVTSPVRGIVKQLLVNTIGGVIQPGSDMVEIV 336

Query: 275 PMDERLLIETRIAPRDIAFIHPDQAAKVKISAYDYSVYGGLDGKVVGISPDTLQDEVKPE 334
           P+D+ LL+E +I P+DIAF+HP Q A VK +AYDY++YGGL  K+  I  DT+ DE K +
Sbjct: 337 PLDDTLLVEAKIRPQDIAFLHPGQEAIVKFTAYDYTIYGGLKAKLEQIGADTITDEDK-K 395

Query: 335 IYYYRVFIRTEQDSLQNKAGKRFAIVPGMIATVDIRTGEKTILDYLIKPLNRAK-EALRE 393
             YY + +RTE+  L     K   I+PGM+A+VDI TG+KTIL YL+KP+ +A+ EAL E
Sbjct: 396 TTYYMIKLRTERSHLGTDE-KPLLIIPGMVASVDIITGKKTILSYLLKPIIKARAEALHE 454

Query: 394 R 394
           R
Sbjct: 455 R 455