Pairwise Alignments

Query, 394 a.a., Protein secretion ABC efflux system, membrane fusion protein from Pseudomonas putida KT2440

Subject, 450 a.a., type I secretion membrane fusion protein, HlyD family from Pseudomonas stutzeri RCH2

 Score =  278 bits (712), Expect = 2e-79
 Identities = 169/415 (40%), Positives = 254/415 (61%), Gaps = 51/415 (12%)

Query: 26  ITLCALMLAAFLAWAAWFEVTEVSTGTGKVIPSSREQVIQSFEGGIVAQMSVAEGDLVER 85
           + L AL+LAA L WA +  + EV+TG GK IPSS+ Q +Q+ EGGIVAQ+ V EG +V +
Sbjct: 41  VWLTALLLAAVLIWANYAVLEEVTTGEGKAIPSSKIQTVQNLEGGIVAQIYVREGQVVNK 100

Query: 86  GQVLAQLDPTKTASSVGESEAKYRAARASQARLQAEVTGKPLTFPESL-RDSPDLIDAET 144
           G  L +LD T+  S+  E+EA+  +  A   RL AE  G+PL  PE + RD+P L + E 
Sbjct: 101 GDTLLRLDNTRFLSNQEETEAERLSLLARVERLAAEAEGRPLALPEEITRDAPQLAEDER 160

Query: 145 ALYQTRRRGL--------------EQTLAGIQD-------SLQLVRSELKITENLAKMGA 183
           ALY++R++ L              +Q +A  +        SL L++ EL ++  L + GA
Sbjct: 161 ALYESRQQRLRSEQRILKEQLTQKQQEVAEFRSKQQQYRSSLSLIQQELNMSTPLVETGA 220

Query: 184 SSRVEVIRLNRQ----RSELEL------KANEARSDYLVRAREELAKASAEADALSEVIR 233
            S+VE++RL R     R  L+       +A  A S+  +++R E ++ +  A+A  ++  
Sbjct: 221 ISQVEILRLRRSIVDVRGALDATTLALPRAEAAASE--IQSRIEQSELAFRAEAFKDLNA 278

Query: 234 GRS-------------DSLTRLTLRSPVRGIVKDIEVNTLGGVVQPGGQVMKIVPMDERL 280
            R+             D ++R T+ SPV GI+K + +NT+GGVVQPG  +++IVP+++ L
Sbjct: 279 ARTLLQKITATSVAIDDRVSRTTVVSPVHGIIKQLRINTIGGVVQPGSDLLEIVPLEDSL 338

Query: 281 LIETRIAPRDIAFIHPDQAAKVKISAYDYSVYGGLDGKVVGISPDTLQDEVKPEIYYYRV 340
           LIE ++ P+DIAF+HP Q A VK SAYDY++YGGL   +  IS DT+ D  K    +Y +
Sbjct: 339 LIEAKVRPQDIAFLHPGQKAMVKFSAYDYTIYGGLKANLELISADTITD--KDGRSFYLI 396

Query: 341 FIRTEQDSLQNKAGKRFAIVPGMIATVDIRTGEKTILDYLIKPLNRAK-EALRER 394
            +RTE++ L    G +  I+PGM+ATVDI TGEK++LDY++KP+ +A+ EALRER
Sbjct: 397 QVRTEKNYL-GSPGHQLVIIPGMVATVDIITGEKSVLDYMLKPILKARHEALRER 450