Pairwise Alignments

Query, 394 a.a., Protein secretion ABC efflux system, membrane fusion protein from Pseudomonas putida KT2440

Subject, 453 a.a., type I secretion membrane fusion protein HlyD from Azospirillum brasilense Sp245

 Score =  136 bits (343), Expect = 1e-36
 Identities = 107/417 (25%), Positives = 193/417 (46%), Gaps = 56/417 (13%)

Query: 22  AGRIITLCALMLAAFLAWAAWFEVTEVSTGTGKVIPSSREQVIQSFEGGIVAQMSVAEGD 81
           AG  + L A+      AWAA   +      +G + P +  ++++  E   + ++ V EGD
Sbjct: 34  AGGFMVL-AVGFGGMTAWAALAPLHSAVMASGALAPETGRKIVKHTETAQIEEILVKEGD 92

Query: 82  LVERGQVLAQLDPTKTASSVGESEAKYRAARASQARLQAEVTGKP-LTFPESL------- 133
            V+ GQVL +LD T+ A+ +      +   +A +ARL AE+  +P + +PE L       
Sbjct: 93  TVKAGQVLMRLDSTEAATRLQVLSTSWLETQALEARLTAELFEQPAIEWPEELLRRRGSD 152

Query: 134 RDSPDLIDAETALYQTRR---------------------RGLEQTLAGIQDSLQLVRSEL 172
           R    L+  +  L+Q RR                     + L++    +   +QL+  +L
Sbjct: 153 RTVEKLMGNQETLFQVRRNQLDTEAKLTKERVITLREEGKSLQEQRRFLAREIQLIEDDL 212

Query: 173 KITENLAKMGASSRVEVIRLNRQRSELE----------LKANEA-----------RSDYL 211
           +IT+ L   G ++R +++   ++ ++L+           +AN+A           R+D+ 
Sbjct: 213 RITQGLLSRGNATRTKLVEQQKEEAQLKGRDRELEARIAQANQAAVDAEGDLLRRRNDFR 272

Query: 212 VRAREELAKASAEADALSEVIRGRSDSLTRLTLRSPVRGIVKDIEVNTLGGVVQPGGQVM 271
            +   +L K+  +   L+E +R  ++ L    +++P  G V        GG +     ++
Sbjct: 273 EKVLVDLEKSRGDVIRLAEQMRDAANRLETRAIKAPDAGTVVMHSHWAAGGTITANEPIL 332

Query: 272 KIVPMDERLLIETRIAPRDIAFIHPDQAAKVKISAYDYSVYGGLDGKVVGISPDTLQDEV 331
            I+P    LL E ++ P+DI  +  D   KV+++AYD  V G LDG V  +S D + D +
Sbjct: 333 DIIPDGRALLAEVKVQPKDIKSLTVDLPVKVQLTAYDSRVVGSLDGTVTYVSADRVMDPI 392

Query: 332 -KPEIYYYRVFIRTEQDSLQNKAGKRFAIVPGMIATVDIRTGEKTILDYLIKPLNRA 387
            + E Y  R+ ++ + DS Q        I PGM     I    +T LDYL++PL+ +
Sbjct: 393 TRQESYIARIKLK-DSDSHQ---VHNLTIKPGMPVEARILLSARTPLDYLVQPLSHS 445